More than 300 homologs were found in PanDaTox collection
for query gene Oter_4250 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010571  Oter_4250  two component LuxR family transcriptional regulator  100 
 
 		 246 aa  487  1e-137  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.59923 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  42.25 
 
 		 217 aa  164  1.0000000000000001e-39  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_013501  Rmar_1123  two component transcriptional regulator, LuxR family  40.28 
 
 		 242 aa  153  2e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  39.55 
 
 		 234 aa  153  2.9999999999999998e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_010571  Oter_3239  two component LuxR family transcriptional regulator  38.94 
 
 		 274 aa  150  2e-35  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_0043  two component LuxR family transcriptional regulator  38.39 
 
 		 234 aa  144  1e-33  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.14113 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  36.97 
 
 		 217 aa  142  4e-33  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  36.97 
 
 		 217 aa  142  4e-33  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  34.12 
 
 		 218 aa  139  3.9999999999999997e-32  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_2295  two component transcriptional regulator, LuxR family  37.56 
 
 		 222 aa  136  4e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.031577  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  34.6 
 
 		 216 aa  134  9.999999999999999e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  39.61 
 
 		 214 aa  132  3.9999999999999996e-30  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  39.52 
 
 		 211 aa  131  9e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  38.35 
 
 		 210 aa  131  1.0000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  38.35 
 
 		 210 aa  131  1.0000000000000001e-29  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  36.15 
 
 		 229 aa  131  1.0000000000000001e-29  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  38.65 
 
 		 215 aa  130  2.0000000000000002e-29  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  39.23 
 
 		 226 aa  129  3e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  36.61 
 
 		 224 aa  129  5.0000000000000004e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.89 
 
 		 215 aa  128  8.000000000000001e-29  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  35.85 
 
 		 214 aa  128  1.0000000000000001e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  37.91 
 
 		 228 aa  126  2.0000000000000002e-28  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  38.21 
 
 		 223 aa  127  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  33.49 
 
 		 215 aa  126  2.0000000000000002e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  36.36 
 
 		 242 aa  127  2.0000000000000002e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  37.86 
 
 		 213 aa  125  5e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  38.68 
 
 		 239 aa  125  5e-28  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  38.65 
 
 		 210 aa  125  6e-28  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  38.16 
 
 		 210 aa  125  7e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  38.31 
 
 		 235 aa  125  7e-28  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal  1 
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  35.95 
 
 		 242 aa  125  7e-28  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  36.89 
 
 		 241 aa  125  8.000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  39.9 
 
 		 210 aa  124  1e-27  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_008309  HS_0042  nitrate/nitrite response regulator protein  34.93 
 
 		 209 aa  124  1e-27  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  38 
 
 		 217 aa  124  1e-27  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  36.44 
 
 		 235 aa  123  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  39.05 
 
 		 210 aa  124  2e-27  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  39 
 
 		 219 aa  124  2e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  38.12 
 
 		 225 aa  124  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  38.16 
 
 		 210 aa  123  2e-27  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  35 
 
 		 223 aa  123  3e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010623  Bphy_4334  two component LuxR family transcriptional regulator  35.44 
 
 		 209 aa  123  3e-27  Burkholderia phymatum STM815  Bacteria  normal  0.255025  normal  1 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.62 
 
 		 216 aa  122  4e-27  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  36.36 
 
 		 230 aa  122  4e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_007974  Rmet_5714  two component LuxR family transcriptional regulator  33.49 
 
 		 210 aa  122  4e-27  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  36.28 
 
 		 212 aa  122  4e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  35.02 
 
 		 222 aa  122  4e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  38.12 
 
 		 210 aa  122  4e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  36.11 
 
 		 222 aa  122  5e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  37.8 
 
 		 230 aa  122  5e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  35.65 
 
 		 225 aa  122  6e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_010501  PputW619_2781  two component LuxR family transcriptional regulator  32.23 
 
 		 204 aa  122  6e-27  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  38.97 
 
 		 228 aa  122  6e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  38.5 
 
 		 207 aa  122  8e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  36.18 
 
 		 218 aa  122  8e-27  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  35.05 
 
 		 232 aa  122  8e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  38.5 
 
 		 219 aa  121  9e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  36.97 
 
 		 215 aa  121  9e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0769384 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  39.11 
 
 		 210 aa  121  9.999999999999999e-27  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  38.46 
 
 		 225 aa  121  9.999999999999999e-27  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  35.32 
 
 		 217 aa  121  9.999999999999999e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  35.45 
 
 		 216 aa  121  9.999999999999999e-27  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  40.1 
 
 		 234 aa  120  9.999999999999999e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_0945  response regulator receiver  36.84 
 
 		 216 aa  121  9.999999999999999e-27  Nocardioides sp. JS614  Bacteria  normal  0.0407172  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  39.11 
 
 		 225 aa  121  9.999999999999999e-27  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  38.81 
 
 		 220 aa  121  9.999999999999999e-27  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  38.42 
 
 		 219 aa  120  1.9999999999999998e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  36.2 
 
 		 218 aa  120  1.9999999999999998e-26  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.972408 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  35.27 
 
 		 217 aa  120  1.9999999999999998e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  37.62 
 
 		 210 aa  120  1.9999999999999998e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  39.11 
 
 		 225 aa  120  1.9999999999999998e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.000789071 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  38.81 
 
 		 219 aa  120  1.9999999999999998e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  36.24 
 
 		 228 aa  120  1.9999999999999998e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  38.19 
 
 		 225 aa  120  1.9999999999999998e-26  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_010571  Oter_1716  two component LuxR family transcriptional regulator  43.72 
 
 		 223 aa  120  1.9999999999999998e-26  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.144163 
 
 
-
 
NC_009455  DehaBAV1_0849  two component LuxR family transcriptional regulator  33.5 
 
 		 209 aa  120  1.9999999999999998e-26  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  40 
 
 		 211 aa  119  3e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  37.5 
 
 		 228 aa  119  3e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  37 
 
 		 207 aa  120  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  35.82 
 
 		 216 aa  120  3e-26  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.73 
 
 		 214 aa  120  3e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  37.75 
 
 		 228 aa  119  3e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  35.58 
 
 		 214 aa  120  3e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  38.05 
 
 		 210 aa  120  3e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal  1 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  38.64 
 
 		 219 aa  119  3e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  35.96 
 
 		 227 aa  119  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_007348  Reut_B4470  two component LuxR family transcriptional regulator  34.88 
 
 		 232 aa  119  3.9999999999999996e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.370568  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  37.9 
 
 		 215 aa  119  3.9999999999999996e-26  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  38.42 
 
 		 215 aa  119  3.9999999999999996e-26  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  37.56 
 
 		 223 aa  119  3.9999999999999996e-26  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_009727  CBUD_0726  response regulator  33.82 
 
 		 211 aa  119  3.9999999999999996e-26  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  37.13 
 
 		 228 aa  119  4.9999999999999996e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  38.64 
 
 		 219 aa  119  4.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  38 
 
 		 220 aa  119  4.9999999999999996e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  39.61 
 
 		 221 aa  119  6e-26  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  37.07 
 
 		 234 aa  119  6e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  37.86 
 
 		 210 aa  119  6e-26  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  35.32 
 
 		 218 aa  119  6e-26  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1526  two component transcriptional regulator, LuxR family  35.78 
 
 		 215 aa  118  7e-26  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.88337  normal  1 
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  35.02 
 
 		 241 aa  118  7e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
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