| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1716 |
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| Symbol | |
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| ID | 6206872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2105454 |
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| End bp | 2106125 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691364 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001818600 |
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| Protein GI | 182413534 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.144163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAC GATCCCAATC CGTGCTTGTG GTCGACGATC ATCCCGTCGT CGTGGCGGGG
CTGCGGCTGC TGTTCGAGTC CGCGGCGGAG TTTCGCGTGG TCGGCGAGGC GAGGGACGCG
TTCACCGCGC GACGGCTGAC CGAGGAACTG AGGCCCGACC TGATCGTGCT GGACCTCGTG
TTGGGCGGAC GCGATGGGCT CGAGTTGATC GAGGATCTGC TGGCGCTGCA CGAGACGACC
AAGGTGCTGG TATATTCGAG CCAGGACGAA GTGCAGTATG CGCGGCGGGC GCTGCGCGCG
GGCGCGCGCG GCTACGTTTC CAAGACCGCG GGGCTCGACG CGGTGGGCGT TGCGTTGACC
ACCATCGCGC AGGGCGATGT CTATGTCAGC GCGACCGTGC AGCGTTCGCT GGTGCGCGAC
TACGCGGAAA GCGCGCGCGG CGTCGCGCCC GCGCCGATCG ACGCGCTCTC GAATCGCGAG
CTGCAGGTTT TTCGACTGCT CGGCACGGGC TTGGGTTCGG CAGACGTCGC GTCGGAGCTG
CGCCTGAGCC TGAAGACAGT GAGCACGTAT CGCGAGCGGC TGAAGAACAA GCTCGCGCTG
GAGAACGCCC GGGAACTCGA GCGCGCGGCC GAAGCCTTCG TTCGCACCGG CCGGCTCGCC
GGCGGCACAT GA
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| Protein sequence | MPARSQSVLV VDDHPVVVAG LRLLFESAAE FRVVGEARDA FTARRLTEEL RPDLIVLDLV
LGGRDGLELI EDLLALHETT KVLVYSSQDE VQYARRALRA GARGYVSKTA GLDAVGVALT
TIAQGDVYVS ATVQRSLVRD YAESARGVAP APIDALSNRE LQVFRLLGTG LGSADVASEL
RLSLKTVSTY RERLKNKLAL ENARELERAA EAFVRTGRLA GGT
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