More than 300 homologs were found in PanDaTox collection
for query gene M446_6108 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010511  M446_6108  response regulator receiver protein  100 
 
 		 120 aa  229  6e-60  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0506844 
 
 
-
 
NC_010511  M446_2829  response regulator receiver protein  75.89 
 
 		 120 aa  168  2e-41  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2866  response regulator receiver protein  75.89 
 
 		 120 aa  168  2e-41  Methylobacterium sp. 4-46  Bacteria  normal  0.216907  normal  1 
 
 
-
 
NC_011887  Mnod_8084  response regulator receiver protein  59.46 
 
 		 124 aa  137  6e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_3890  response regulator receiver protein  57.76 
 
 		 184 aa  133  7.000000000000001e-31  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.173819 
 
 
-
 
NC_010505  Mrad2831_0401  response regulator receiver protein  54.24 
 
 		 129 aa  122  2e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1341  response regulator receiver  42.11 
 
 		 131 aa  94.7  4e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.22844  normal  1 
 
 
-
 
NC_007925  RPC_4054  response regulator receiver domain-containing protein  45.83 
 
 		 136 aa  90.5  7e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_1362  response regulator receiver domain-containing protein  38.98 
 
 		 130 aa  88.2  3e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.281273  normal  1 
 
 
-
 
NC_011004  Rpal_4728  response regulator receiver protein  46.07 
 
 		 130 aa  87.8  4e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2095  response regulator receiver protein  39.25 
 
 		 216 aa  82.8  0.000000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1743  response regulator receiver protein  41.12 
 
 		 129 aa  82.4  0.000000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.961506 
 
 
-
 
NC_007406  Nwi_1027  response regulator receiver  41.76 
 
 		 135 aa  80.9  0.000000000000006  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A1301  LuxR response regulator receiver  45.12 
 
 		 210 aa  79.7  0.00000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.549132  n/a   
 
 
-
 
NC_009428  Rsph17025_0245  response regulator receiver protein  41.88 
 
 		 202 aa  79.3  0.00000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010681  Bphyt_2166  two component transcriptional regulator, LuxR family  40.57 
 
 		 220 aa  79.3  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2505  two component LuxR family transcriptional regulator  42.45 
 
 		 210 aa  79  0.00000000000002  Burkholderia sp. 383  Bacteria  normal  0.382458  normal  0.897172 
 
 
-
 
NC_007964  Nham_1905  response regulator receiver domain-containing protein  35.54 
 
 		 131 aa  79  0.00000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.558841  n/a   
 
 
-
 
NC_010552  BamMC406_3516  two component LuxR family transcriptional regulator  42.45 
 
 		 210 aa  79  0.00000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.584359  normal  0.0331166 
 
 
-
 
NC_009485  BBta_2787  response regulator receiver protein  40.35 
 
 		 134 aa  78.2  0.00000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.058704  normal  0.0692516 
 
 
-
 
NC_007778  RPB_3850  two component LuxR family transcriptional regulator  45.68 
 
 		 209 aa  78.6  0.00000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_1878  two component transcriptional regulator, LuxR family  45.68 
 
 		 208 aa  77.8  0.00000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_3910  two component LuxR family transcriptional regulator  42.45 
 
 		 210 aa  78.2  0.00000000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.855973 
 
 
-
 
NC_008391  Bamb_5346  two component LuxR family transcriptional regulator  42.45 
 
 		 210 aa  78.2  0.00000000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.0593225  normal  0.752943 
 
 
-
 
NC_008543  Bcen2424_3610  two component LuxR family transcriptional regulator  42.45 
 
 		 210 aa  78.2  0.00000000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  0.603365  normal  1 
 
 
-
 
NC_010086  Bmul_5088  two component LuxR family transcriptional regulator  42.45 
 
 		 241 aa  78.2  0.00000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.685625 
 
 
-
 
NC_008463  PA14_09690  putative two-component response regulator  42.45 
 
 		 214 aa  77.4  0.00000000000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00000807943  normal  1 
 
 
-
 
NC_007958  RPD_1499  LuxR family two component transcriptional regulator  45.68 
 
 		 209 aa  77  0.00000000000008  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_4067  two component LuxR family transcriptional regulator  45.68 
 
 		 209 aa  77  0.00000000000009  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_0400  two component LuxR family transcriptional regulator  38.52 
 
 		 202 aa  76.6  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.331086  normal  1 
 
 
-
 
NC_007973  Rmet_1194  two component LuxR family transcriptional regulator  41.46 
 
 		 210 aa  76.6  0.0000000000001  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00813352  normal  0.892025 
 
 
-
 
NC_007298  Daro_3108  LuxR response regulator receiver  42.68 
 
 		 202 aa  75.5  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.786061  normal  1 
 
 
-
 
NC_007404  Tbd_1743  two component LuxR family transcriptional regulator  44.44 
 
 		 209 aa  75.5  0.0000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.518394 
 
 
-
 
NC_009485  BBta_0530  two component LuxR family transcriptional regulator  45.68 
 
 		 211 aa  75.9  0.0000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_0582  two component LuxR family transcriptional regulator  40.86 
 
 		 206 aa  75.9  0.0000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.812865 
 
 
-
 
NC_007406  Nwi_0241  LuxR family transcriptional regulator  45.78 
 
 		 216 aa  75.1  0.0000000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0907  two component LuxR family transcriptional regulator  40.17 
 
 		 202 aa  75.1  0.0000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.285724  n/a   
 
 
-
 
NC_009049  Rsph17029_2567  response regulator receiver protein  40.17 
 
 		 202 aa  75.1  0.0000000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.94208 
 
 
-
 
NC_007925  RPC_3796  two component LuxR family transcriptional regulator  45.68 
 
 		 209 aa  74.3  0.0000000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_0903  putative two-component response regulator  41.51 
 
 		 212 aa  73.6  0.0000000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  0.96795  n/a   
 
 
-
 
NC_009511  Swit_0268  two component LuxR family transcriptional regulator  36.61 
 
 		 203 aa  73.6  0.0000000000009  Sphingomonas wittichii RW1  Bacteria  normal  0.0126561  normal  0.200699 
 
 
-
 
NC_004347  SO_4157  DNA-binding response regulator  43.37 
 
 		 202 aa  73.6  0.0000000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007650  BTH_II0317  LuxR family DNA-binding response regulator  39.62 
 
 		 250 aa  73.6  0.0000000000009  Burkholderia thailandensis E264  Bacteria  normal  0.0309445  n/a   
 
 
-
 
NC_007651  BTH_I1862  LuxR family DNA-binding response regulator  40.7 
 
 		 212 aa  73.2  0.000000000001  Burkholderia thailandensis E264  Bacteria  normal  0.340696  n/a   
 
 
-
 
NC_007794  Saro_1616  two component LuxR family transcriptional regulator  35.85 
 
 		 218 aa  73.2  0.000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_1466  response regulator receiver protein  37.4 
 
 		 131 aa  73.6  0.000000000001  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_2968  two component LuxR family transcriptional regulator  35.71 
 
 		 207 aa  73.2  0.000000000001  Caulobacter sp. K31  Bacteria  normal  1  normal  0.138 
 
 
-
 
NC_010338  Caul_2344  two component LuxR family transcriptional regulator  40.22 
 
 		 208 aa  72  0.000000000002  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006348  BMA1723  LuxR family DNA-binding response regulator  40.7 
 
 		 212 aa  72.4  0.000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0901353  n/a   
 
 
-
 
NC_009080  BMA10247_1505  LuxR family DNA-binding response regulator  40.7 
 
 		 212 aa  72.4  0.000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007434  BURPS1710b_2748  LuxR family DNA-binding response regulator  40.7 
 
 		 212 aa  72.4  0.000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1552  response regulator receiver protein  40 
 
 		 199 aa  72.4  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_0645  two component LuxR family transcriptional regulator  42.68 
 
 		 240 aa  72.4  0.000000000002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_3192  two component transcriptional regulator, LuxR family  44.44 
 
 		 212 aa  72.4  0.000000000002  Thauera sp. MZ1T  Bacteria  normal  0.513085  n/a   
 
 
-
 
NC_009511  Swit_2977  response regulator receiver protein  40 
 
 		 208 aa  72.4  0.000000000002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.286368 
 
 
-
 
NC_009439  Pmen_3815  response regulator receiver protein  39.62 
 
 		 212 aa  72.8  0.000000000002  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009074  BURPS668_2614  LuxR family DNA-binding response regulator  40.7 
 
 		 212 aa  72.4  0.000000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.37823  n/a   
 
 
-
 
NC_008836  BMA10229_A3087  LuxR family DNA-binding response regulator  40.7 
 
 		 212 aa  72.4  0.000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3517  two component LuxR family transcriptional regulator  42.35 
 
 		 201 aa  72.8  0.000000000002  Shewanella sp. MR-4  Bacteria  normal  0.751217  normal  1 
 
 
-
 
NC_008785  BMASAVP1_A2232  LuxR family DNA-binding response regulator  40.7 
 
 		 212 aa  72.4  0.000000000002  Burkholderia mallei SAVP1  Bacteria  normal  0.97455  n/a   
 
 
-
 
NC_012850  Rleg_1551  response regulator receiver protein  40.19 
 
 		 277 aa  72  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.26584  hitchhiker  0.0028864 
 
 
-
 
NC_009076  BURPS1106A_2670  LuxR family DNA-binding response regulator  40.7 
 
 		 212 aa  72.4  0.000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3697  two component LuxR family transcriptional regulator  43.37 
 
 		 201 aa  72.4  0.000000000002  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007510  Bcep18194_A5445  two component LuxR family transcriptional regulator  40.7 
 
 		 212 aa  71.6  0.000000000003  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_2210  two component LuxR family transcriptional regulator  39.02 
 
 		 208 aa  71.6  0.000000000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.891166  n/a   
 
 
-
 
NC_007964  Nham_1906  response regulator FixJ  45.68 
 
 		 205 aa  72  0.000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  0.700153  n/a   
 
 
-
 
NC_010681  Bphyt_2593  two component transcriptional regulator, LuxR family  41.38 
 
 		 214 aa  71.6  0.000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.382122  hitchhiker  0.00235574 
 
 
-
 
NC_010551  BamMC406_2049  two component LuxR family transcriptional regulator  40.7 
 
 		 212 aa  71.6  0.000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.435361  normal  1 
 
 
-
 
NC_008062  Bcen_5938  two component LuxR family transcriptional regulator  40.7 
 
 		 212 aa  71.6  0.000000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.172889  n/a   
 
 
-
 
NC_008390  Bamb_2176  two component LuxR family transcriptional regulator  40.7 
 
 		 212 aa  71.6  0.000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.116055  n/a   
 
 
-
 
NC_010508  Bcenmc03_2157  two component LuxR family transcriptional regulator  40.7 
 
 		 212 aa  71.6  0.000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008542  Bcen2424_2139  two component LuxR family transcriptional regulator  40.7 
 
 		 212 aa  71.6  0.000000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_1131  two component LuxR family transcriptional regulator  40.7 
 
 		 212 aa  71.6  0.000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0589444  normal  0.612677 
 
 
-
 
NC_008825  Mpe_A2130  two component LuxR family transcriptional regulator  41.46 
 
 		 207 aa  71.2  0.000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.281977  normal  1 
 
 
-
 
NC_012560  Avin_25360  Response regulator, LuxR family  40.57 
 
 		 246 aa  71.2  0.000000000004  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1539  two component LuxR family transcriptional regulator  41.38 
 
 		 214 aa  71.6  0.000000000004  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.274992 
 
 
-
 
NC_009485  BBta_2788  response regulator FixJ  33.61 
 
 		 205 aa  71.6  0.000000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0210669  normal  0.0766422 
 
 
-
 
NC_010622  Bphy_1472  two component LuxR family transcriptional regulator  41.38 
 
 		 214 aa  71.2  0.000000000004  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.781461 
 
 
-
 
NC_002947  PP_3551  LuxR family DNA-binding response regulator  43.48 
 
 		 210 aa  70.9  0.000000000005  Pseudomonas putida KT2440  Bacteria  normal  0.178316  normal  1 
 
 
-
 
NC_009512  Pput_2223  response regulator receiver protein  43.48 
 
 		 210 aa  70.9  0.000000000005  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_2371  two component LuxR family transcriptional regulator  43.48 
 
 		 209 aa  71.2  0.000000000005  Pseudomonas putida GB-1  Bacteria  normal  0.820742  normal  1 
 
 
-
 
NC_010725  Mpop_3891  two component transcriptional regulator, LuxR family  41.98 
 
 		 213 aa  70.5  0.000000000007  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal  0.188997 
 
 
-
 
NC_007406  Nwi_1028  response regulator FixJ  35.71 
 
 		 205 aa  70.5  0.000000000008  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1342  response regulator FixJ  44.44 
 
 		 205 aa  70.1  0.000000000009  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.400465  normal  1 
 
 
-
 
NC_009438  Sputcn32_0534  response regulator receiver protein  40.96 
 
 		 200 aa  69.7  0.00000000001  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2996  LuxR response regulator receiver  40.74 
 
 		 198 aa  70.1  0.00000000001  Dechloromonas aromatica RCB  Bacteria  normal  0.437807  normal  1 
 
 
-
 
NC_008825  Mpe_A2536  two component regulator  39.13 
 
 		 204 aa  69.7  0.00000000001  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.378867 
 
 
-
 
NC_013440  Hoch_2281  response regulator receiver protein  43.27 
 
 		 128 aa  69.7  0.00000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.498531 
 
 
-
 
NC_008340  Mlg_1832  two component LuxR family transcriptional regulator  40.48 
 
 		 208 aa  70.1  0.00000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0872  two component LuxR family transcriptional regulator  40.86 
 
 		 210 aa  68.9  0.00000000002  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  43.75 
 
 		 476 aa  69.3  0.00000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_0436  two component LuxR family transcriptional regulator  42.17 
 
 		 202 aa  69.3  0.00000000002  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014148  Plim_3049  response regulator receiver  32.14 
 
 		 228 aa  69.3  0.00000000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.651154  n/a   
 
 
-
 
NC_009379  Pnuc_0732  response regulator receiver protein  41.67 
 
 		 215 aa  68.6  0.00000000003  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.298469  n/a   
 
 
-
 
NC_007794  Saro_1578  two component LuxR family transcriptional regulator  37.63 
 
 		 207 aa  68.6  0.00000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661779  n/a   
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  42.86 
 
 		 225 aa  68.6  0.00000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2096  two component LuxR family transcriptional regulator  35.45 
 
 		 212 aa  68.6  0.00000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_3046  response regulator receiver modulated metal dependent phosphohydrolase  35.87 
 
 		 365 aa  68.2  0.00000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0429754  n/a   
 
 
-
 
NC_011663  Sbal223_0478  two component transcriptional regulator, LuxR family  42.17 
 
 		 200 aa  67.8  0.00000000005  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_0451  response regulator receiver protein  42.17 
 
 		 200 aa  67.8  0.00000000005  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>