| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0268 |
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| Symbol | |
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| ID | 5196339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 281847 |
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| End bp | 282458 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579808 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001260777 |
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| Protein GI | 148553195 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0126561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.200699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACA CGCGGCTGGT GCATATCGTC GACGACGAGG AGGCGATCCG CCGATCGACG
CGCTTCATGC TGACGACGGT GGGCTATGCC GTCGAATGCT GGGAGTCGGG CACCGCCTTC
CTGAAGGCCG TCCGCCATGC CGCGCCGGGC TGCATCCTGC TCGACGTGCG CATGCCCGAG
ATGGACGGGC TGCAGGTCCA GCAGCAGCTC AACGAGCGCG GCGTCACCAT GCCGGTGATC
ATCCTGACCG GCCATGGCGA CATCTCGACC GCGGTGCAGG CGATGAAGGC CGGCGCGGTC
GACTTCATCG AGAAGCCGTT CGAGAGGACG GCGCTGCTGG CGGCGATCGA GGCGGCGCAT
GCGCGCCTCG GCCGGCAGGC GGACGAGGCG GCGCGCGGCG CCGAGGCACA GGTCATGCTG
GCCAAGCTGA CGGCGCGCGA GCGCGAGGTG CTCGACGGGC TGGCGCGGGG CCTGCCCAAC
AAGACGATCG CCTATGACCT CGCCATCTCC TCGCGCACCG TCGAGGTGCA TCGCGCGAAC
CTGATGACCA AGCTGGGCGT CAAGAGCCTG TCCGACGCGT TGCGGATCGC CTTCGCCGCC
GGGCTCGGAT AG
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| Protein sequence | MDDTRLVHIV DDEEAIRRST RFMLTTVGYA VECWESGTAF LKAVRHAAPG CILLDVRMPE
MDGLQVQQQL NERGVTMPVI ILTGHGDIST AVQAMKAGAV DFIEKPFERT ALLAAIEAAH
ARLGRQADEA ARGAEAQVML AKLTAREREV LDGLARGLPN KTIAYDLAIS SRTVEVHRAN
LMTKLGVKSL SDALRIAFAA GLG
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