Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1539 |
Symbol | |
ID | 4003461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3214343 |
End bp | 3214987 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637948093 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_559468 |
Protein GI | 91784262 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.274992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCC CAGTCACCAC ACAGGAAACT GTCTTTGTCG TCGACGACGA CGAGGCCGTG CGAGATTCGC TGCGCTGGCT GCTGGAGGCG AACGGCTACC GCGTGCAGTG CTTCTCCAGC GCCGAGCAGT TCATCGACGC ATGGCAGCCG CACACGCATC CGGGCCAGAT TGCCTGCCTG ATCCTCGACG TGCGGATGTC CGGCATGAGC GGGCTCGAGT TGCAGGAACG CCTGATCGCC GACAACGCGT CGCTGCCGAT CATCTTCGTG ACGGGTCACG GCGACGTGCC GATGGCCGTG TCCACGATGA AAAAAGGCGC GATGGATTTC ATCGAAAAGC CGTTCGACGA AGCCGAGTTG CGCAAGCTGG TCGAGCGCAT GCTCGACAAG GCGCGCAGCG AAAGCACCAG CGTGCAGCAG CAGCGCGCTG CGGCAGAACG TCTCGGCAAG CTGACCGCGC GCGAACATCA GGTGCTCGAG CGCATCATTG CCGGCCGCCT GAACAAGCAG ATCGCCGACG ACCTCGGCAT CAGCATCAAG ACGGTCGAAG CGCACCGCGC GAACATCATG GAAAAGCTCA ACGTCAACAC GGTCGCCGAT CTGCTGCGAC TCGCGCTGTC GAACAAACCG CAACCGGCGC AATAA
|
Protein sequence | MNSPVTTQET VFVVDDDEAV RDSLRWLLEA NGYRVQCFSS AEQFIDAWQP HTHPGQIACL ILDVRMSGMS GLELQERLIA DNASLPIIFV TGHGDVPMAV STMKKGAMDF IEKPFDEAEL RKLVERMLDK ARSESTSVQQ QRAAAERLGK LTAREHQVLE RIIAGRLNKQ IADDLGISIK TVEAHRANIM EKLNVNTVAD LLRLALSNKP QPAQ
|
| |