More than 300 homologs were found in PanDaTox collection
for query gene BBta_2787 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_2787  response regulator receiver protein  100 
 
 		 134 aa  272  1.0000000000000001e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.058704  normal  0.0692516 
 
 
-
 
NC_007778  RPB_1362  response regulator receiver domain-containing protein  59.83 
 
 		 130 aa  140  8e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.281273  normal  1 
 
 
-
 
NC_007925  RPC_4054  response regulator receiver domain-containing protein  55.74 
 
 		 136 aa  139  1.9999999999999998e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1341  response regulator receiver  52.76 
 
 		 131 aa  134  4e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.22844  normal  1 
 
 
-
 
NC_011004  Rpal_4728  response regulator receiver protein  58.12 
 
 		 130 aa  132  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_1905  response regulator receiver domain-containing protein  47.97 
 
 		 131 aa  123  1e-27  Nitrobacter hamburgensis X14  Bacteria  normal  0.558841  n/a   
 
 
-
 
NC_007406  Nwi_1027  response regulator receiver  52.17 
 
 		 135 aa  122  2e-27  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_1578  two component LuxR family transcriptional regulator  44.07 
 
 		 207 aa  99  2e-20  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.661779  n/a   
 
 
-
 
NC_009507  Swit_5293  two component LuxR family transcriptional regulator  42.86 
 
 		 203 aa  98.2  4e-20  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3275  response regulator FixJ  42.86 
 
 		 205 aa  90.5  8e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_1267  response regulator receiver protein  40.68 
 
 		 123 aa  89.4  1e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_3812  two component LuxR family transcriptional regulator  37.04 
 
 		 208 aa  88.6  3e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.922787  normal  0.026414 
 
 
-
 
NC_008554  Sfum_0943  two component LuxR family transcriptional regulator  39.1 
 
 		 214 aa  87.8  4e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_0400  two component LuxR family transcriptional regulator  40.35 
 
 		 202 aa  88.2  4e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.331086  normal  1 
 
 
-
 
NC_011887  Mnod_8084  response regulator receiver protein  38.1 
 
 		 124 aa  87.8  5e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2788  response regulator FixJ  39.32 
 
 		 205 aa  87.8  5e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0210669  normal  0.0766422 
 
 
-
 
NC_008825  Mpe_A0811  two-component response regulator  35.16 
 
 		 209 aa  87  7e-17  Methylibium petroleiphilum PM1  Bacteria  normal  0.184612  normal  1 
 
 
-
 
NC_007778  RPB_1363  response regulator FixJ  40.17 
 
 		 205 aa  87  7e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.433868  normal  1 
 
 
-
 
NC_007298  Daro_3108  LuxR response regulator receiver  35.48 
 
 		 202 aa  86.7  9e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.786061  normal  1 
 
 
-
 
NC_008781  Pnap_1779  response regulator receiver protein  36.03 
 
 		 208 aa  86.3  1e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.264941  hitchhiker  0.00228897 
 
 
-
 
NC_007908  Rfer_2210  two component LuxR family transcriptional regulator  36.36 
 
 		 208 aa  86.3  1e-16  Rhodoferax ferrireducens T118  Bacteria  normal  0.891166  n/a   
 
 
-
 
NC_007973  Rmet_1194  two component LuxR family transcriptional regulator  35.56 
 
 		 210 aa  86.7  1e-16  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00813352  normal  0.892025 
 
 
-
 
NC_008048  Sala_2461  response regulator receiver protein  37.9 
 
 		 132 aa  86.3  1e-16  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.461526 
 
 
-
 
NC_010511  M446_6109  two component LuxR family transcriptional regulator  35.48 
 
 		 210 aa  85.5  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0504113 
 
 
-
 
NC_009952  Dshi_2568  response regulator protein  37.61 
 
 		 214 aa  84.7  4e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0467638  hitchhiker  0.0000000292578 
 
 
-
 
NC_010338  Caul_2343  response regulator receiver protein  36.29 
 
 		 138 aa  84.3  5e-16  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007484  Noc_1701  two component LuxR family transcriptional regulator  33.33 
 
 		 201 aa  84.3  5e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0166117  n/a   
 
 
-
 
NC_009379  Pnuc_0732  response regulator receiver protein  34.51 
 
 		 215 aa  84.3  5e-16  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.298469  n/a   
 
 
-
 
NC_007964  Nham_0872  two component LuxR family transcriptional regulator  37.01 
 
 		 210 aa  84.3  5e-16  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0268  two component LuxR family transcriptional regulator  35.4 
 
 		 203 aa  84  6e-16  Sphingomonas wittichii RW1  Bacteria  normal  0.0126561  normal  0.200699 
 
 
-
 
NC_007347  Reut_A1301  LuxR response regulator receiver  35.56 
 
 		 210 aa  83.6  8e-16  Ralstonia eutropha JMP134  Bacteria  normal  0.549132  n/a   
 
 
-
 
NC_010511  M446_2829  response regulator receiver protein  41.12 
 
 		 120 aa  83.2  0.000000000000001  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_2871  response regulator receiver protein  32.03 
 
 		 206 aa  82.8  0.000000000000001  Pseudomonas putida F1  Bacteria  normal  0.313361  normal  0.346414 
 
 
-
 
NC_010511  M446_2866  response regulator receiver protein  41.12 
 
 		 120 aa  83.2  0.000000000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.216907  normal  1 
 
 
-
 
NC_012791  Vapar_2160  two component transcriptional regulator, LuxR family  34.56 
 
 		 210 aa  82.4  0.000000000000002  Variovorax paradoxus S110  Bacteria  normal  0.563306  n/a   
 
 
-
 
NC_008554  Sfum_0582  two component LuxR family transcriptional regulator  33.87 
 
 		 206 aa  82.8  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.812865 
 
 
-
 
NC_007513  Syncc9902_1771  two component transcriptional regulator  33.61 
 
 		 244 aa  82  0.000000000000003  Synechococcus sp. CC9902  Bacteria  normal  1  n/a   
 
 
-
 
NC_007925  RPC_4053  response regulator FixJ  38.46 
 
 		 205 aa  82  0.000000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A1539  two component LuxR family transcriptional regulator  33.82 
 
 		 214 aa  82  0.000000000000003  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.274992 
 
 
-
 
NC_010084  Bmul_1131  two component LuxR family transcriptional regulator  35.51 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0589444  normal  0.612677 
 
 
-
 
NC_008785  BMASAVP1_A2232  LuxR family DNA-binding response regulator  35.51 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia mallei SAVP1  Bacteria  normal  0.97455  n/a   
 
 
-
 
NC_006348  BMA1723  LuxR family DNA-binding response regulator  35.51 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0901353  n/a   
 
 
-
 
NC_010508  Bcenmc03_2157  two component LuxR family transcriptional regulator  35.51 
 
 		 212 aa  81.6  0.000000000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007434  BURPS1710b_2748  LuxR family DNA-binding response regulator  35.51 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007510  Bcep18194_A5445  two component LuxR family transcriptional regulator  35.51 
 
 		 212 aa  81.6  0.000000000000004  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008836  BMA10229_A3087  LuxR family DNA-binding response regulator  35.51 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_1505  LuxR family DNA-binding response regulator  35.51 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007651  BTH_I1862  LuxR family DNA-binding response regulator  34.78 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia thailandensis E264  Bacteria  normal  0.340696  n/a   
 
 
-
 
NC_009074  BURPS668_2614  LuxR family DNA-binding response regulator  35.51 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia pseudomallei 668  Bacteria  normal  0.37823  n/a   
 
 
-
 
NC_009076  BURPS1106A_2670  LuxR family DNA-binding response regulator  35.51 
 
 		 212 aa  81.3  0.000000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010551  BamMC406_2049  two component LuxR family transcriptional regulator  35.51 
 
 		 212 aa  81.6  0.000000000000004  Burkholderia ambifaria MC40-6  Bacteria  normal  0.435361  normal  1 
 
 
-
 
NC_008048  Sala_2460  two component LuxR family transcriptional regulator  33.61 
 
 		 210 aa  81.6  0.000000000000004  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.475025 
 
 
-
 
NC_008062  Bcen_5938  two component LuxR family transcriptional regulator  35.51 
 
 		 212 aa  81.6  0.000000000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.172889  n/a   
 
 
-
 
NC_010681  Bphyt_2593  two component transcriptional regulator, LuxR family  33.82 
 
 		 214 aa  81.3  0.000000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.382122  hitchhiker  0.00235574 
 
 
-
 
NC_008390  Bamb_2176  two component LuxR family transcriptional regulator  35.51 
 
 		 212 aa  81.6  0.000000000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.116055  n/a   
 
 
-
 
NC_008542  Bcen2424_2139  two component LuxR family transcriptional regulator  35.51 
 
 		 212 aa  81.6  0.000000000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2095  response regulator receiver protein  35 
 
 		 216 aa  80.9  0.000000000000006  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_1906  response regulator FixJ  37.61 
 
 		 205 aa  80.9  0.000000000000006  Nitrobacter hamburgensis X14  Bacteria  normal  0.700153  n/a   
 
 
-
 
NC_008752  Aave_2460  two component LuxR family transcriptional regulator  37.31 
 
 		 208 aa  80.9  0.000000000000006  Acidovorax citrulli AAC00-1  Bacteria  normal  0.293905  normal  1 
 
 
-
 
NC_011894  Mnod_2117  response regulator FixJ  39.47 
 
 		 205 aa  80.9  0.000000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B3602  LuxR response regulator receiver  36.29 
 
 		 206 aa  80.5  0.000000000000007  Ralstonia eutropha JMP134  Bacteria  normal  0.66617  n/a   
 
 
-
 
NC_010338  Caul_0630  response regulator FixJ  34.13 
 
 		 204 aa  80.5  0.000000000000007  Caulobacter sp. K31  Bacteria  normal  0.136769  normal  0.239148 
 
 
-
 
NC_008825  Mpe_A2536  two component regulator  37.29 
 
 		 204 aa  80.5  0.000000000000008  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.378867 
 
 
-
 
NC_004578  PSPTO_5548  DNA-binding response regulator, LuxR family  36.07 
 
 		 212 aa  80.5  0.000000000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1644  two component LuxR family transcriptional regulator  34.13 
 
 		 207 aa  80.5  0.000000000000008  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0578076 
 
 
-
 
NC_010531  Pnec_0704  two component transcriptional regulator, LuxR family  33.8 
 
 		 214 aa  79.7  0.00000000000001  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.753304  normal  0.399327 
 
 
-
 
NC_009719  Plav_2041  response regulator receiver protein  36.67 
 
 		 214 aa  80.1  0.00000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.212509  hitchhiker  0.00400016 
 
 
-
 
NC_007948  Bpro_2674  two component LuxR family transcriptional regulator  35.77 
 
 		 208 aa  79.7  0.00000000000001  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1342  response regulator FixJ  37.61 
 
 		 205 aa  79.7  0.00000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.400465  normal  1 
 
 
-
 
NC_010505  Mrad2831_2580  response regulator receiver protein  39.34 
 
 		 133 aa  79.7  0.00000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010681  Bphyt_2166  two component transcriptional regulator, LuxR family  34.48 
 
 		 220 aa  79  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3813  two component transcriptional regulator, LuxR family  41.58 
 
 		 202 aa  79  0.00000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_3982  two component LuxR family transcriptional regulator  36.5 
 
 		 216 aa  79.3  0.00000000000002  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.0179399 
 
 
-
 
NC_010172  Mext_3506  response regulator receiver  41.58 
 
 		 202 aa  79  0.00000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.32714  normal  1 
 
 
-
 
NC_009720  Xaut_1744  response regulator receiver protein  36.44 
 
 		 213 aa  78.6  0.00000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.933486  normal  0.721753 
 
 
-
 
NC_008340  Mlg_1621  two component LuxR family transcriptional regulator  36.07 
 
 		 201 aa  79  0.00000000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_1028  response regulator FixJ  36.75 
 
 		 205 aa  78.2  0.00000000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2579  response regulator FixJ  37.17 
 
 		 205 aa  78.6  0.00000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_1472  two component LuxR family transcriptional regulator  33.57 
 
 		 214 aa  78.2  0.00000000000003  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.781461 
 
 
-
 
NC_011894  Mnod_2118  response regulator receiver protein  41.46 
 
 		 125 aa  78.6  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_1825  two component transcriptional regulator, LuxR family  36.84 
 
 		 205 aa  78.2  0.00000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0736095 
 
 
-
 
NC_011662  Tmz1t_3866  two component transcriptional regulator, LuxR family  38.1 
 
 		 224 aa  78.6  0.00000000000003  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3862  response regulator receiver protein  34.11 
 
 		 200 aa  78.2  0.00000000000003  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_5088  LuxR response regulator receiver  33.61 
 
 		 212 aa  78.2  0.00000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011365  Gdia_1975  two component transcriptional regulator, winged helix family  33.07 
 
 		 236 aa  77.8  0.00000000000004  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.206633  normal  1 
 
 
-
 
NC_010338  Caul_2460  response regulator receiver protein  35.59 
 
 		 131 aa  78.2  0.00000000000004  Caulobacter sp. K31  Bacteria  normal  0.732516  normal  0.518565 
 
 
-
 
NC_008825  Mpe_A2130  two component LuxR family transcriptional regulator  32.56 
 
 		 207 aa  77.8  0.00000000000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.281977  normal  1 
 
 
-
 
NC_009092  Shew_3240  two component LuxR family transcriptional regulator  30.71 
 
 		 207 aa  77.8  0.00000000000005  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.989265 
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  38.66 
 
 		 466 aa  77.4  0.00000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3891  two component transcriptional regulator, LuxR family  38.6 
 
 		 213 aa  77.4  0.00000000000006  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal  0.188997 
 
 
-
 
NC_008543  Bcen2424_3610  two component LuxR family transcriptional regulator  33.59 
 
 		 210 aa  77.4  0.00000000000006  Burkholderia cenocepacia HI2424  Bacteria  normal  0.603365  normal  1 
 
 
-
 
NC_008044  TM1040_2441  two component transcriptional regulator  36.43 
 
 		 233 aa  77.4  0.00000000000006  Ruegeria sp. TM1040  Bacteria  normal  0.325552  normal  1 
 
 
-
 
NC_008321  Shewmr4_3517  two component LuxR family transcriptional regulator  35.9 
 
 		 201 aa  77.4  0.00000000000006  Shewanella sp. MR-4  Bacteria  normal  0.751217  normal  1 
 
 
-
 
NC_010515  Bcenmc03_3910  two component LuxR family transcriptional regulator  33.59 
 
 		 210 aa  77.4  0.00000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.855973 
 
 
-
 
NC_010338  Caul_2968  two component LuxR family transcriptional regulator  35.4 
 
 		 207 aa  77  0.00000000000008  Caulobacter sp. K31  Bacteria  normal  1  normal  0.138 
 
 
-
 
NC_008786  Veis_1921  response regulator receiver protein  35.83 
 
 		 208 aa  77  0.00000000000008  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.287441  normal  0.0849999 
 
 
-
 
NC_009621  Smed_5540  response regulator receiver protein  33.33 
 
 		 226 aa  77  0.00000000000008  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.0494649 
 
 
-
 
NC_008322  Shewmr7_0436  two component LuxR family transcriptional regulator  35.9 
 
 		 202 aa  77  0.00000000000008  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_1997  two component transcriptional regulator, LuxR family protein  32.26 
 
 		 197 aa  77  0.00000000000008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.333764  n/a   
 
 
-
 
NC_004347  SO_4157  DNA-binding response regulator  32.8 
 
 		 202 aa  76.6  0.00000000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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