Gene SO_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4157 
Symbol 
ID1171766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4332021 
End bp4332629 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content46% 
IMG OID637345885 
ProductDNA-binding response regulator 
Protein accessionNP_719686 
Protein GI24375643 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCA TGCTGCCACT GTATTTAGTC GATGATGATG AAGCGATTCT CGACTCCTTA 
GGGTTTATGC TCAGGCAATT TGGTTACCAA GTACAAACCT TTAGCAGTGG ACGGGATTTT 
TTAGCCCAAT GTCCGTTAAC ACAGGCTGGC TGCGTGATTT TAGATAGCCG AATGCCGGAG 
ATCACCGGCC AAGAAGTGCA GCAAAAACTA CTTGAAACCC AAAGCCCATT GGGAGTTATC 
TTTCTCACGG GGCACGGTGA TTTGCCCATG GCATTAAGCG CCTTTCGTAA GGGTGCATGC 
GATTTTTTTC AAAAGCCGGT ATCTGGCAAA GCCCTAGTAC AAGCCATTAA AAAAGCGCAT 
AAAGAAAGCC AAGCCAGCTT TGAGCAACAG AGTCTGCAGC ATAAATTTGC CCAACTGACC 
GACCGTGAAC AACAAGTGTT AGCCCATGTG GTTCAAGGTA TGACCAACAA GCAGATCTCC 
GAGGCCATGT ATTTATCCTT AAGAACCATT GAAGTGCACC GCGCTAAGAT CATGAAAAAG 
CTCGAAGTCA GTAATATGGC AGAATTAGTA CAGCACTTAG CCCACCTAAA TACACTCTTA 
CCGGAGTAA
 
Protein sequence
MSTMLPLYLV DDDEAILDSL GFMLRQFGYQ VQTFSSGRDF LAQCPLTQAG CVILDSRMPE 
ITGQEVQQKL LETQSPLGVI FLTGHGDLPM ALSAFRKGAC DFFQKPVSGK ALVQAIKKAH 
KESQASFEQQ SLQHKFAQLT DREQQVLAHV VQGMTNKQIS EAMYLSLRTI EVHRAKIMKK 
LEVSNMAELV QHLAHLNTLL PE