Gene Bcen2424_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_2139 
Symbol 
ID4449815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand+ 
Start bp2376297 
End bp2376935 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID639694194 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_835783 
Protein GI116690160 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCC CTGTCACCAC CACTCAGGAA ACCGTCTTTG TCGTCGACGA CGACGAGGCC 
GTACGGGACT CGCTGCGCTG GCTGCTGGAG GCGAACGGCT ATCGCGTGCA ATGCTTCTCG 
AGCGCCGAGC AGTTCCTCGA TGCCTATCAG CCGGCGCAGC AGGCCGGCCA GATCGCCTGC 
CTGATCCTCG ACGTGCGGAT GTCGGGCATG AGCGGCCTCG AATTGCAGGA ACGCCTGATC 
GCCGACAATG CCGCGCTGCC GATCATCTTC GTCACCGGTC ACGGCGACGT GCCGATGGCC 
GTGTCGACGA TGAAAAAGGG TGCGATGGAC TTTATCGAGA AACCGTTCGA CGAAGCCGAG 
CTGCGCAAGC TCGTCGAGCG GATGCTCGAC AAGGCCCGAA GCGAAAGCAA GAGCGTGCAG 
GAGCAGCGTG CCGCGAGCGA ACGCCTGTCG AAGCTGACCG CGCGCGAGCA GCAGGTGCTC 
GAGCGGATCA TCGCCGGCCG CCTGAACAAG CAGATCGCCG ACGACCTCGG CATCAGCATC 
AAGACGGTCG AGGCGCACCG CGCGAACATC ATGGAAAAGC TCAACGTCAA CACGGTGGCC 
GACCTGCTGC GCCTCGCGCT GTCGAAGAAG CAGGCCTGA
 
Protein sequence
MNSPVTTTQE TVFVVDDDEA VRDSLRWLLE ANGYRVQCFS SAEQFLDAYQ PAQQAGQIAC 
LILDVRMSGM SGLELQERLI ADNAALPIIF VTGHGDVPMA VSTMKKGAMD FIEKPFDEAE 
LRKLVERMLD KARSESKSVQ EQRAASERLS KLTAREQQVL ERIIAGRLNK QIADDLGISI 
KTVEAHRANI MEKLNVNTVA DLLRLALSKK QA