Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5938 |
Symbol | |
ID | 4097188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 514769 |
End bp | 515407 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638019218 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_625776 |
Protein GI | 107028681 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.172889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGCC CTGTCACCAC CACTCAGGAA ACCGTCTTTG TCGTCGACGA CGACGAGGCC GTACGGGACT CGCTGCGCTG GCTGCTGGAG GCGAACGGCT ATCGCGTGCA ATGCTTCTCG AGCGCCGAGC AGTTCCTCGA TGCCTATCAG CCGGCGCAGC AGGCCGGCCA GATCGCCTGC CTGATCCTCG ACGTGCGGAT GTCGGGCATG AGCGGCCTCG AATTGCAGGA ACGCCTGATC GCCGACAATG CCGCGCTGCC GATCATCTTC GTCACCGGTC ACGGCGACGT GCCGATGGCC GTGTCGACGA TGAAAAAGGG TGCGATGGAC TTTATCGAGA AACCGTTCGA CGAAGCCGAG CTGCGCAAGC TCGTCGAGCG GATGCTCGAC AAGGCCCGAA GCGAAAGCAA GAGCGTGCAG GAGCAGCGTG CCGCGAGCGA ACGCCTGTCG AAGCTGACCG CGCGCGAGCA GCAGGTGCTC GAGCGGATCA TCGCCGGCCG CCTGAACAAG CAGATCGCCG ACGACCTCGG CATCAGCATC AAGACGGTCG AGGCGCACCG CGCGAACATC ATGGAAAAGC TCAACGTCAA CACGGTGACC GACCTGCTGC GCCTCGCGCT GTCGAAGAAG CAGGCCTGA
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Protein sequence | MNSPVTTTQE TVFVVDDDEA VRDSLRWLLE ANGYRVQCFS SAEQFLDAYQ PAQQAGQIAC LILDVRMSGM SGLELQERLI ADNAALPIIF VTGHGDVPMA VSTMKKGAMD FIEKPFDEAE LRKLVERMLD KARSESKSVQ EQRAASERLS KLTAREQQVL ERIIAGRLNK QIADDLGISI KTVEAHRANI MEKLNVNTVT DLLRLALSKK QA
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