Gene BURPS1710b_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_2748 
Symbolcsx049 
ID3690005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand+ 
Start bp3046082 
End bp3046720 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID637729204 
ProductLuxR family DNA-binding response regulator 
Protein accessionYP_334134 
Protein GI76811469 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCC CTGTCACCAC CTCACAGGAA ACCGTCTTTG TCGTCGACGA CGACGAGGCC 
GTGCGCGACT CGCTGCGCTG GCTGCTGGAG GCAAACGGCT ATCGCGTGCA ATGCTTCTCG 
AGCGCCGAGC AGTTCCTCGA TGCCTATCAG CCCGCGCAGC AAGCGGGACA GATCGCGTGC 
CTGATCCTCG ACGTGCGGAT GTCGGGGATG AGCGGCCTCG AGCTGCAGGA GCGCCTGATC 
GCCGAGAACG CGGCGCTCCC GATCATCTTC GTGACGGGCC ACGGCGACGT GCCGATGGCC 
GTGTCGACGA TGAAGAAAGG CGCGATGGAC TTCATCGAGA AGCCGTTCGA CGAGGCCGAG 
CTGCGCAAGC TCGTCGAGCG CATGCTCGAG AAGGCGCGAA ACGAGAGCAA GAGCGTCCAG 
GAGCAGCGCG CGGCGAGCGA GCGGCTGTCG AAGCTGACGG CGCGCGAGCA GCAGGTGCTC 
GAGCGGATCA TCGCCGGGCG CCTGAACAAG CAGATCGCCG ACGACCTCGG CATCAGCATC 
AAGACGGTCG AGGCGCACCG CGCGAACATC ATGGAAAAGC TCAACGTCAA CACGGTCGCC 
GATCTGCTGC GCCTCGCGCT GTCGAAGAAG CAGGCGTAA
 
Protein sequence
MNSPVTTSQE TVFVVDDDEA VRDSLRWLLE ANGYRVQCFS SAEQFLDAYQ PAQQAGQIAC 
LILDVRMSGM SGLELQERLI AENAALPIIF VTGHGDVPMA VSTMKKGAMD FIEKPFDEAE 
LRKLVERMLE KARNESKSVQ EQRAASERLS KLTAREQQVL ERIIAGRLNK QIADDLGISI 
KTVEAHRANI MEKLNVNTVA DLLRLALSKK QA