| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5088 |
|---|
| Symbol | |
|---|
| ID | 3370646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 6037440 |
|---|
| End bp | 6038078 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655463 |
|---|
| Product | LuxR response regulator receiver |
|---|
| Protein accession | YP_238153 |
|---|
| Protein GI | 66048312 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG CTGCCACTGC ATCACCGACC GAAGAGCCGA TCATCTACGT CCTCGATGAC
GACCTGTCGG TGCGCTCCTC GCTGGAGGAC CTGCTGGCCT CGGTCGGATT GCGCAGCATG
CTGTTCGGCT CGACCCGCGA GTTCCTGGAC ACCCCGCGTC CTGACGCGCC GGGCTGTCTG
ATTCTGGACA TCCGCATGCC GGGCATGAGC GGCCTGGATT TCCAGGAACA TATGGCCAGG
TCGGGGATTT CCCTACCGGT CATTTTCATC ACCGGGCATG GTGACATCCC CATGTCCGTG
CGAGCCATGA AGGCCGGTGC GGTGGAGTTT CTGACCAAGC CCTTTCGCGA TCAGGACTTG
CTCGATGCCA TTCAGCAGGG CTTGGCGCAG GATCGCAGTC GGCGCCAGAG TGCCGCCGTC
GAAGCCGAAC TGCGGCGCCG CCACGCAAGC CTCAATCTCG GTGAGCAGCA GGTGATGGAG
CTGGTGGTCA GCGGCCTGCT CAACAAACAG ATTGCAGCCC GGCTGAACGT GAGCGAAATC
ACCGTCAAGG TCCGCCGTGG CTCGGTGATG CGCAAGATGG AAGCCGATTC CCTGGCCGAC
CTCGTCAAGT TTGCCGAGCG CCTCAAAGAG CTGCATTGA
|
|---|
| Protein sequence | MSTAATASPT EEPIIYVLDD DLSVRSSLED LLASVGLRSM LFGSTREFLD TPRPDAPGCL
ILDIRMPGMS GLDFQEHMAR SGISLPVIFI TGHGDIPMSV RAMKAGAVEF LTKPFRDQDL
LDAIQQGLAQ DRSRRQSAAV EAELRRRHAS LNLGEQQVME LVVSGLLNKQ IAARLNVSEI
TVKVRRGSVM RKMEADSLAD LVKFAERLKE LH
|
|---|
| |