| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1997 |
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| Symbol | |
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| ID | 4278909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2368615 |
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| End bp | 2369208 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638134784 |
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| Product | two component transcriptional regulator, LuxR family protein |
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| Protein accession | YP_750681 |
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| Protein GI | 114563168 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.333764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACATGC TTAAAGATAT TTATATGGTG GATGATGACC TAGCAATTCT TGATTCTATG
CAATTTATGC TATTGCAATA TGAATACAAC TTACAGGTAT TCAATAGTGC CATTTCGTTT
ATTAATACCA TTGATATTAC CCTACCAGGT TGTCTTATTG TGGACAGCAA AATGCCAGAA
ATTACAGGCC AAGAACTACA ACAAAAATTA ATTGCCGCTA ACAGTCCGTT AGGCATCATT
TTTTTAACAG GTCACGGTGA TCTGCCGATG GCGGTAAATG CATTTAGACA AGGGGCCTGT
TATTTTTTTC AAAAACCTGT GAACGGTAAA GAGCTGGTTG TCGCTATAGA AAAGGCCTTT
ACGTGTAGTC ATAAGATGTT TGAATCTATT CTACTAAAAC AACGATATAA CACGTTAACA
GAGCGTGAAA TCCAAGTATT GCATCTATTA ATTGAAGGTA AAACTAACAA ACAAATGGCA
GATGAATTAT ACCTTTCTCT GCGCACAATT GAGGTGCACC GCTCTAAAAT TATTAAAAAA
CTAGCTGTGC ATAATGCTGC TGAACTGGCT AAATTCAGCC CTTTATTAGC CTAG
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| Protein sequence | MHMLKDIYMV DDDLAILDSM QFMLLQYEYN LQVFNSAISF INTIDITLPG CLIVDSKMPE
ITGQELQQKL IAANSPLGII FLTGHGDLPM AVNAFRQGAC YFFQKPVNGK ELVVAIEKAF
TCSHKMFESI LLKQRYNTLT EREIQVLHLL IEGKTNKQMA DELYLSLRTI EVHRSKIIKK
LAVHNAAELA KFSPLLA
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