Gene BTH_I1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I1862 
Symbol 
ID3848658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand- 
Start bp2103116 
End bp2103754 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID637841531 
ProductLuxR family DNA-binding response regulator 
Protein accessionYP_442392 
Protein GI83719547 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.340696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCC CTGTCACCAC CTCTCAGGAA ACCGTCTTTG TCGTCGACGA CGACGAGGCC 
GTGCGCGACT CGCTGCGCTG GCTGCTGGAG GCAAACGGCT ATCGCGTGCA GTGCTTCTCG 
AGCGCCGAGC AGTTCCTCGA GGCGTATCAG CCCGCGCAGC AGGCGGGACA GATCGCGTGC 
CTGATCCTCG ACGTGCGGAT GTCCGGGATG AGCGGCCTCG AGTTGCAGGA GCGTCTGATC 
GCCGAGAACG CGGCGCTCCC GATCATCTTC GTGACGGGCC ACGGCGACGT GCCGATGGCC 
GTGTCGACGA TGAAGAAGGG CGCGATGGAC TTCATCGAGA AACCGTTCGA CGAGGCCGAG 
CTGCGCAAGC TCGTCGAGCG CATGCTCGAC AAGGCGCGCA GCGAGAGCAA GAGCGTCCAG 
GAGCAGCGTG CGGCGAGCGA GCGCCTGTCG AAGCTGACGG CGCGCGAGCA GCAGGTGCTC 
GAGCGGATCA TTGCGGGCCG TCTGAACAAG CAGATCGCCG ACGATCTCGG GATCAGCATC 
AAGACGGTCG AGGCGCACCG CGCGAACATC ATGGAAAAGC TCAACGTCAA CACGGTGGCC 
GACCTGCTGC GGCTCGCGCT GTCGAAGAAG CAGGCGTAA
 
Protein sequence
MNSPVTTSQE TVFVVDDDEA VRDSLRWLLE ANGYRVQCFS SAEQFLEAYQ PAQQAGQIAC 
LILDVRMSGM SGLELQERLI AENAALPIIF VTGHGDVPMA VSTMKKGAMD FIEKPFDEAE 
LRKLVERMLD KARSESKSVQ EQRAASERLS KLTAREQQVL ERIIAGRLNK QIADDLGISI 
KTVEAHRANI MEKLNVNTVA DLLRLALSKK QA