Gene Rfer_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2210 
Symbol 
ID3963157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp2416430 
End bp2417056 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content57% 
IMG OID637917031 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_523465 
Protein GI89900994 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.891166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGA TACCAAAAAA GGGCACGGTT TACGTGGTGG ACGACGACGA AGCGGTACGT 
GACTCGCTTC AATGGCTACT CGAAGGCAAA GACTACCGGG TCCGCTGTTT TGAATCCGGC 
GAGTCATTTT TAAGCCGTTA CGACGCCCGC GAGGTGGCCT GTTTGATCGT GGACATCCGC 
ATGGGTGGCA TGACCGGACT GGAACTGCAA AGTCGTTTGC TGGAGAGCCA CTCGCCACTT 
CCCATTGTCT TCATCACCGG CCACGGTGAC GTGCCGATGG CGGTAGACAC CATGAAAAAA 
GGTGCGATGG ACTTTATCCA GAAGCCATTC AAGGAAGATC AACTGGTCAC ACTGGTCGAG 
CGCATGCTGG AGCAGGCCAA AGACACTTTT GCCGACCATC AGAGCGCGGC CAGCCGGGAC 
GCCCTGATGG CACGTCTGAC GCTGCGCGAA GCACAGGTGC TGGAACGCAT CGTGGCCGGG 
CGCCTGAACA AGCAGATTGC CGACGACCTG GGCATCAGCA TCAAAACGGT GGAGGCGCAC 
CGCGCCAACA TCATGGAAAA GCTCAACGCC AATACGGTCG CCGACTTGCT GAAAATTGCT 
TTGGGACAAA CCCCCGCAAA AGCTTAG
 
Protein sequence
MSLIPKKGTV YVVDDDEAVR DSLQWLLEGK DYRVRCFESG ESFLSRYDAR EVACLIVDIR 
MGGMTGLELQ SRLLESHSPL PIVFITGHGD VPMAVDTMKK GAMDFIQKPF KEDQLVTLVE 
RMLEQAKDTF ADHQSAASRD ALMARLTLRE AQVLERIVAG RLNKQIADDL GISIKTVEAH 
RANIMEKLNA NTVADLLKIA LGQTPAKA