| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3812 |
|---|
| Symbol | |
|---|
| ID | 3567968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 4094847 |
|---|
| End bp | 4095473 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637682286 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_287010 |
|---|
| Protein GI | 71909423 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 0.922787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.026414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACC ACACTGCGTC GCTCGTCCCC ACCGTCTACG TCGTCGATGA CGATGCCTCG
ATCCGGGAAT CTCTGAGCAG CCTGATTCGC TCGGCCGGCA TGGCCGTCGA AGTCTTCGCT
TCCCCGCTCG AATTCCTGGC CCGGGACAAA CTCAGCGATT TCGCCTGCAT CGTCCTCGAT
GTGCGCATGC CGGAAATGGA CGGGCTGGCA CTGCAGGAAA GGCTGGCCGA ACACGCCCGG
GAAATTCCGA TCATCTTCAT CACCGGCCAT GGCGACGTGC CGCTGGCCGT GCGGGCCATG
AAAGCCGGCG CCATCGATTT CCTGAACAAG CCGTTCAACG ACACTGACCT GTTGCAGGCC
ATCTCCGTTG CCCTGTCACG GGTCAGCGCC AGTTCGCAGG AGCGCATGGA AGTGGCCGAC
CTGCGCGCCC GCTTCGAAAC CCTGACGCCG CGCGAGAAGC AGATCCTGTT CGCGGTGGCC
CAGGGCAAGC TGAACAAATG CATCGCGCAG GATCTGGATG TGACCGAAAG CACCGTCAAG
GTGCACCGGC ACAACGTGAT GGCCAAGATG CACATCAAGT CGGTCGCCGA ATTGGCGCTG
GCCATCCAGC GCCTGAAACC GCAATGA
|
|---|
| Protein sequence | MTNHTASLVP TVYVVDDDAS IRESLSSLIR SAGMAVEVFA SPLEFLARDK LSDFACIVLD
VRMPEMDGLA LQERLAEHAR EIPIIFITGH GDVPLAVRAM KAGAIDFLNK PFNDTDLLQA
ISVALSRVSA SSQERMEVAD LRARFETLTP REKQILFAVA QGKLNKCIAQ DLDVTESTVK
VHRHNVMAKM HIKSVAELAL AIQRLKPQ
|
|---|
| |