Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2461 |
Symbol | |
ID | 4081338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2603092 |
End bp | 2603490 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638010839 |
Product | response regulator receiver protein |
Protein accession | YP_617501 |
Protein GI | 103487940 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.461526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGTGC ACATCGGGCA ATCGTCCCGT CACCCCTTCA CGATATTGGT CTCGGACGAC GACCCGGGCG TTCGCCGTTC GACGCAATTG ATGCTGCGGG CCCAGGGATT TCGGGTCCGG GCCTATACTA GCGGCAGCGC GCTATTGGCC GACCCGCGAT CACTTCATGC CGATTGCCTT GTCGTCGACT TTCGCATGCC GGACATCGAC GGCCTGTCAC TCCTGAGACG CTTACGCTCG AAGGGCTGGT GCGGTTGCGC GATCATGATC TCGGCCTATC ATGACGACGC GCTGGAACGC GAAGCGAGGC GCGTTGGATT CGAGCATGTC ATTGCAAAGC CGCTGATCGC GCGCGCACTG CTCGAGGCGA TCGCTTGCTC CGCAAGGGAT CATGGCTGA
|
Protein sequence | MSVHIGQSSR HPFTILVSDD DPGVRRSTQL MLRAQGFRVR AYTSGSALLA DPRSLHADCL VVDFRMPDID GLSLLRRLRS KGWCGCAIMI SAYHDDALER EARRVGFEHV IAKPLIARAL LEAIACSARD HG
|
| |