Gene Bamb_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2176 
Symbol 
ID4311041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp2392849 
End bp2393487 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID638150001 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_774066 
Protein GI115352227 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.116055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGCC CTGTCACCAC CACTCAGGAA ACCGTCTTCG TCGTCGACGA CGACGAGGCC 
GTACGGGACT CGCTGCGCTG GCTGCTGGAG GCGAACGGCT ATCGCGTGCA ATGCTTCTCG 
AGCGCGGAGC AGTTCCTCGA TGCGTACCAG CCGGCGCAGC AGGCCGGCCA GATCGCCTGC 
CTGATCCTCG ACGTCCGGAT GTCGGGCATG AGCGGCCTCG AGCTGCAGGA GCGCCTGATC 
GCCGACAACG CCGCGCTGCC GATCATCTTC GTCACGGGCC ACGGCGACGT GCCGATGGCG 
GTGTCGACGA TGAAAAAGGG TGCGATGGAC TTTATCGAGA AACCGTTCGA CGAGGCCGAG 
CTGCGCAAGC TCGTCGAGCG GATGCTCGAC AAGGCCCGAA GCGAAAGCAA GAGCGTCCAG 
GAGCAGCGCG CCGCGAGCGA GCGTCTGTCG AAGCTGACCG CGCGCGAGCA GCAGGTGCTC 
GAGCGGATCA TTGCCGGCCG CCTGAACAAG CAAATCGCCG ACGATCTCGG GATCAGCATC 
AAGACGGTCG AGGCGCACCG CGCGAACATC ATGGAAAAGC TCAACGTCAA CACGGTGGCC 
GATCTGCTGC GCCTCGCGCT GTCGAAGAAG CAGGCCTGA
 
Protein sequence
MNSPVTTTQE TVFVVDDDEA VRDSLRWLLE ANGYRVQCFS SAEQFLDAYQ PAQQAGQIAC 
LILDVRMSGM SGLELQERLI ADNAALPIIF VTGHGDVPMA VSTMKKGAMD FIEKPFDEAE 
LRKLVERMLD KARSESKSVQ EQRAASERLS KLTAREQQVL ERIIAGRLNK QIADDLGISI 
KTVEAHRANI MEKLNVNTVA DLLRLALSKK QA