| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2096 |
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| Symbol | |
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| ID | 4173775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2540765 |
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| End bp | 2541403 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055104 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_661668 |
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| Protein GI | 109898413 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATA AAAGCACGTC GTTTGAAACA GAACAAATCG TACATATTAT TGATGATGAC
GAGGCAGTAC TTGACTCTCT CAGTATGTTG TTGGATTCCG TTGGTGTGCA CAACGCCATT
TATGCTAACG CACAAGCATT CTTAAACAGC TTTTCATCAG ACGATATTAG TATGCTAAGT
GGCTGCATTG TACTGGATAT CCGCATGCCT GGTATGAGTG GAATGGAATG CCAACAGCGC
TTAGAAGCGC TTAAATGTCC TTTACCCATC ATATTTATTA CCGGCCATGG CGATGTACCA
ATGGCTGTCG AGGCGATGAA AAAAGGCGCG ATAGAGTTTA TTCAGAAGCC ATTTCGTGAA
CAGGTTCTGC TCGACTGCAT ACAGCACGCT TTACAGGTCA ATCGAGACAA CCAACAGCGT
ACCTTGCACG CATTAGAGGT AGAAAAAAGA TGCCAATCTC TTACTGAGCG AGAAACTGAA
GTGATGCATA GGGTGATTGC CGGTCAAGCA AATAAAGTGA TAGCCAGTGA GCTAAATTTA
AGTCAACGCA CGGTTGAGAT CCACCGTGCA AATGTTATGG ACAAAATGCA GGTAAGGTCT
TTAGCTGAAC TTGTTACCCT GGTGGTGGCT AAAGAGTAA
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| Protein sequence | MKNKSTSFET EQIVHIIDDD EAVLDSLSML LDSVGVHNAI YANAQAFLNS FSSDDISMLS
GCIVLDIRMP GMSGMECQQR LEALKCPLPI IFITGHGDVP MAVEAMKKGA IEFIQKPFRE
QVLLDCIQHA LQVNRDNQQR TLHALEVEKR CQSLTERETE VMHRVIAGQA NKVIASELNL
SQRTVEIHRA NVMDKMQVRS LAELVTLVVA KE
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