| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3815 |
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| Symbol | |
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| ID | 5106046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4201748 |
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| End bp | 4202386 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505070 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001189295 |
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| Protein GI | 146308830 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGC AACAACTGGT TTACGTGGTC GATGACGACC AGGGCATGCT CGACTCGACG
CTCTGGCTGC TGGAGTCGGT GGGGCTGAGC GGCGTGCCCT TCACCAGCGG CCGCGCCTTT
CTCGAGGCCT GCGACCCGAC TGCCAATGCC TGCGTGCTGC TCGATGTGCG CATGCCCGGC
ATGGGCGGGC TGAACGTGCA GGAGGAGATG CGCGCGCGCG GCATCGACCT GCCGATAATT
TTCGTCAGCG GCCATGCCGA CGTGCCCATC GTGGTGCGCG CGTTCAAGGC CGGGGCGGTG
GATTTCATCG AGAAGCCCTA CAACGAGCAG CTGTTGCTCG ACAGCGTGCA GCAGGCGCTG
GATCGCCGTC CGGCCAGGCC GCGGCGCGAT CCGCGTTTGG CCGAGGTGCA GGCGCGGCTC
GACCAGCTCA CCCCGCGCGA GCGCGACGTG CTGCTGCCCT TGGTGCGCGG CTACACCAAC
CGCGAAGTCG CCGAGCAGCT CGATATCAGC GTGAAGACCG TCGACCTGTA TCGTTCGCGG
GTGATGAAGC GCATGCAGGC CGAGACGCTG CCGGAGCTGG TGGGCATGGC CATCGCCGCC
GGGCTGGTGG ATGCGCTGGC GATTCGTTCA GAGATTTGA
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| Protein sequence | MQMQQLVYVV DDDQGMLDST LWLLESVGLS GVPFTSGRAF LEACDPTANA CVLLDVRMPG
MGGLNVQEEM RARGIDLPII FVSGHADVPI VVRAFKAGAV DFIEKPYNEQ LLLDSVQQAL
DRRPARPRRD PRLAEVQARL DQLTPRERDV LLPLVRGYTN REVAEQLDIS VKTVDLYRSR
VMKRMQAETL PELVGMAIAA GLVDALAIRS EI
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