| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5346 |
|---|
| Symbol | |
|---|
| ID | 4314235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2388140 |
|---|
| End bp | 2388772 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638153187 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_777227 |
|---|
| Protein GI | 115360089 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0593225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.752943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAC CCGCTCCGAT CGTATACATC GTCGACGACG ACAGCGGCAT GCGGACGTCG
CTTGCGTGGT TGCTCGAATC GGTCGGCATC GCGTCCGAAG GATTCGCGAA TGCCGCCGAC
TTTCTCGCGC GCTTCGACGT GAACCTGCCT GCGTGCCTGG TGCTCGACGT GAGGATGCCG
GAGAAAAGCG GGTTCGACGT GCAGGCGGAG CTGAATGCGC GCGGCGCGAC GCTGCCGGTG
ATCTTCGTCA GCGGGCACGG CGACATTCCG ATGTCGGTGC GCGCGCTGCA GAACGGCGCG
ATCGACTTCG TCGAGAAGCC GTACAACTCG CAGCAGATGC TCGAGCGCGT GCAACGCGCG
CTGCGGCTCG CGCAGCAGCG GCACGCGGTC GACCGGCATC ACCGCGAGCT GCGCCAGCGG
CTCGATGCGC TGACCGCGCG CGAGAAGGAA GTCCTGCGCG GCGTCGTCGA CGGCAAGGGC
AGCAAGCAGA TCGCGTCGGA CCTGTCGATC AGCGTGAAGA CCGTCGACGT GCATCGCGCG
AGCATCAAGG AGAAGCTCGG CGCGACGTCG ATCGCCGCGC TCGTGCGCGA CGTGATGGTC
GTGTGGGGCG GCGACAACGA AACGCCGCGC TAG
|
|---|
| Protein sequence | MTSPAPIVYI VDDDSGMRTS LAWLLESVGI ASEGFANAAD FLARFDVNLP ACLVLDVRMP
EKSGFDVQAE LNARGATLPV IFVSGHGDIP MSVRALQNGA IDFVEKPYNS QQMLERVQRA
LRLAQQRHAV DRHHRELRQR LDALTAREKE VLRGVVDGKG SKQIASDLSI SVKTVDVHRA
SIKEKLGATS IAALVRDVMV VWGGDNETPR
|
|---|
| |