Gene Plim_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3049 
Symbol 
ID9139761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp3942414 
End bp3943100 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content51% 
IMG OID 
Productresponse regulator receiver 
Protein accessionYP_003631069 
Protein GI296123291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.651154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTC CCCCAGTAAT GTCGCCCACA GTTTTTGTCG TTGACGACGA CGAGGATCTG 
CGCGATTCCG TTGTGACGTT GCTCCGCGCT TCGGGGTATG TAGTGCGTAG TTTCGTCAGC 
GGAGATGATT TCGCTTCGAA GTATCAACAG ACACAACCCG GCTGTTTGCT GTTAGATATC 
CGCATGCCGG GAATTGGGGG CCTGGAACTC TATCAACAGC TCCTGCTACA AGGCCGACGT 
CTGCCGGTGA TTTTCATGAC AGCACATGCG AGCGTCGAAA TCGCGGTCAC GGCCATGAAA 
TCAGGAGCTA TAGAATTTCT GGAGAAGCCA TTTGAGTCGC AGCGACTATT AAAGCTCGTC 
GCTCAAGCCC TCGAACTGGA TGCAGCATGG CGGCAAAGTG AGTCGCGATT CGAGCGGCTC 
GAAACCGCCG TTCAAGAATT GAGTGCGACA GATATCGAGA CGCTGGATCT CATCCTGCAG 
GGAGAAAGCA ATAAAGGTAT GGCTACCAGA CTGTTTATCT CTGAACGAGC CATTGAACTG 
CGTCGTCAGC GCCTGATGAG AAAACTCAAA GTTCAAAGCC TGGCAGAACT GCTGCAACTT 
ACGATTACAC ATCGAGTGCT CGCAGAAGTC CGCCAACTTC AGAGAAATGA GCAAGGAAGA 
GTACCTACGC TAAATCGTAT TCAATGA
 
Protein sequence
MTIPPVMSPT VFVVDDDEDL RDSVVTLLRA SGYVVRSFVS GDDFASKYQQ TQPGCLLLDI 
RMPGIGGLEL YQQLLLQGRR LPVIFMTAHA SVEIAVTAMK SGAIEFLEKP FESQRLLKLV 
AQALELDAAW RQSESRFERL ETAVQELSAT DIETLDLILQ GESNKGMATR LFISERAIEL 
RRQRLMRKLK VQSLAELLQL TITHRVLAEV RQLQRNEQGR VPTLNRIQ