More than 300 homologs were found in PanDaTox collection
for query gene Tcr_1984 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  100 
 
 
954 aa  1952    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.98 
 
 
1170 aa  520  1e-146  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0077  methyl-accepting chemotaxis sensory transducer  31.74 
 
 
941 aa  348  2e-94  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000232315  n/a   
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  35.98 
 
 
712 aa  315  1.9999999999999998e-84  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  37.52 
 
 
815 aa  308  3e-82  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0027  methyl-accepting chemotaxis sensory transducer  32.7 
 
 
959 aa  286  1.0000000000000001e-75  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
601 aa  284  6.000000000000001e-75  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
755 aa  274  5.000000000000001e-72  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_007520  Tcr_1394  methyl-accepting chemotaxis sensory transducer  30.93 
 
 
840 aa  269  2e-70  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.3 
 
 
1123 aa  265  2e-69  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  42.86 
 
 
860 aa  265  2e-69  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  43.59 
 
 
678 aa  261  5.0000000000000005e-68  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  36.16 
 
 
733 aa  261  6e-68  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
843 aa  261  6e-68  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  44.73 
 
 
863 aa  260  8e-68  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  36.57 
 
 
752 aa  260  9e-68  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  47.3 
 
 
679 aa  260  9e-68  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
740 aa  258  3e-67  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  46.67 
 
 
679 aa  258  4e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  45.4 
 
 
664 aa  257  7e-67  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  35.41 
 
 
753 aa  256  1.0000000000000001e-66  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
706 aa  255  3e-66  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  34.69 
 
 
705 aa  254  4.0000000000000004e-66  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  46.13 
 
 
664 aa  253  9.000000000000001e-66  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  48.37 
 
 
584 aa  253  1e-65  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2100  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.13 
 
 
665 aa  253  1e-65  Shewanella baltica OS223  Bacteria  normal  0.328344  normal 
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.52 
 
 
864 aa  253  2e-65  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  43.77 
 
 
945 aa  251  4e-65  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  45.9 
 
 
793 aa  251  4e-65  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  43.67 
 
 
767 aa  251  5e-65  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
552 aa  250  9e-65  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  44.72 
 
 
792 aa  249  1e-64  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  43.81 
 
 
775 aa  249  1e-64  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  43.39 
 
 
543 aa  249  2e-64  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  46.86 
 
 
542 aa  249  2e-64  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  48.31 
 
 
622 aa  248  3e-64  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  42.31 
 
 
610 aa  248  4e-64  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  43.58 
 
 
797 aa  248  4.9999999999999997e-64  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  50.35 
 
 
585 aa  247  6.999999999999999e-64  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_009052  Sbal_2114  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
657 aa  246  1.9999999999999999e-63  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  44.97 
 
 
567 aa  246  1.9999999999999999e-63  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
583 aa  245  3e-63  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
707 aa  244  5e-63  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.14 
 
 
701 aa  243  9e-63  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  45.81 
 
 
578 aa  243  9e-63  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  45.29 
 
 
654 aa  243  1e-62  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
745 aa  243  2e-62  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.14 
 
 
888 aa  242  2e-62  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  46.3 
 
 
541 aa  243  2e-62  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  44.9 
 
 
656 aa  241  2.9999999999999997e-62  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  44.9 
 
 
656 aa  241  2.9999999999999997e-62  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  44.77 
 
 
657 aa  241  5.999999999999999e-62  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  47.02 
 
 
580 aa  240  6.999999999999999e-62  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  45.94 
 
 
618 aa  240  8e-62  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  47.7 
 
 
586 aa  239  1e-61  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  45.6 
 
 
547 aa  239  1e-61  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  45.6 
 
 
547 aa  240  1e-61  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
566 aa  239  2e-61  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  45.6 
 
 
547 aa  239  2e-61  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  45.6 
 
 
547 aa  239  2e-61  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  44.86 
 
 
632 aa  239  2e-61  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1405  methyl-accepting chemotaxis sensory transducer  46.28 
 
 
599 aa  239  2e-61  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  50.17 
 
 
525 aa  238  3e-61  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  45.6 
 
 
547 aa  238  3e-61  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  48.76 
 
 
508 aa  238  3e-61  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.64 
 
 
610 aa  238  5.0000000000000005e-61  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  48.06 
 
 
598 aa  237  9e-61  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
597 aa  236  1.0000000000000001e-60  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0222  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
642 aa  236  2.0000000000000002e-60  Caulobacter sp. K31  Bacteria  normal  0.414219  normal  0.376796 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
520 aa  236  2.0000000000000002e-60  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  43.18 
 
 
537 aa  236  2.0000000000000002e-60  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  46.88 
 
 
589 aa  236  2.0000000000000002e-60  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  47.35 
 
 
532 aa  235  2.0000000000000002e-60  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  45.92 
 
 
579 aa  235  3e-60  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
620 aa  235  3e-60  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
620 aa  235  4.0000000000000004e-60  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  45.49 
 
 
620 aa  235  4.0000000000000004e-60  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  46.88 
 
 
527 aa  234  8.000000000000001e-60  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010681  Bphyt_2718  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.95 
 
 
599 aa  234  8.000000000000001e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  45.87 
 
 
548 aa  233  9e-60  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
589 aa  233  9e-60  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
657 aa  233  9e-60  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  43.47 
 
 
556 aa  233  1e-59  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_008391  Bamb_5471  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
620 aa  233  1e-59  Burkholderia ambifaria AMMD  Bacteria  normal  0.407039  normal 
 
 
-
 
NC_012880  Dd703_2108  methyl-accepting chemotaxis sensory transducer  44.84 
 
 
556 aa  233  1e-59  Dickeya dadantii Ech703  Bacteria  normal  0.0190315  n/a   
 
 
-
 
NC_010581  Bind_3620  methyl-accepting chemotaxis sensory transducer  43.16 
 
 
677 aa  233  2e-59  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0125911 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  32.95 
 
 
691 aa  233  2e-59  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
600 aa  232  2e-59  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_010086  Bmul_4997  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
620 aa  233  2e-59  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.245568 
 
 
-
 
NC_010552  BamMC406_3618  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
620 aa  233  2e-59  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0344374  normal 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  45.26 
 
 
562 aa  232  2e-59  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_009436  Ent638_2456  methyl-accepting protein IV  46.85 
 
 
533 aa  232  2e-59  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  46.96 
 
 
642 aa  233  2e-59  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  46.49 
 
 
573 aa  232  2e-59  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_013421  Pecwa_0495  methyl-accepting chemotaxis sensory transducer  46.28 
 
 
525 aa  231  3e-59  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1989  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
556 aa  231  3e-59  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.00286784  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  47.77 
 
 
517 aa  231  3e-59  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4294  methyl-accepting chemotaxis sensory transducer  44.2 
 
 
539 aa  232  3e-59  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  47.77 
 
 
464 aa  231  4e-59  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.88 
 
 
598 aa  231  4e-59  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
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