More than 300 homologs were found in PanDaTox collection
for query gene Tcr_1394 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_1394  methyl-accepting chemotaxis sensory transducer  100 
 
 
840 aa  1686    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.49 
 
 
954 aa  271  5e-71  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  32.44 
 
 
601 aa  268  2e-70  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0077  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
941 aa  262  2e-68  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000232315  n/a   
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  29.75 
 
 
815 aa  245  1.9999999999999999e-63  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  31.01 
 
 
712 aa  225  3e-57  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  27.2 
 
 
600 aa  216  1.9999999999999998e-54  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.28 
 
 
1170 aa  212  2e-53  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  28.88 
 
 
745 aa  210  7e-53  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  35.45 
 
 
863 aa  209  2e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  33.76 
 
 
860 aa  208  4e-52  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_013216  Dtox_0613  methyl-accepting chemotaxis sensory transducer  29.3 
 
 
759 aa  207  7e-52  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.194714 
 
 
-
 
NC_007520  Tcr_0027  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
959 aa  206  1e-51  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.1 
 
 
864 aa  206  1e-51  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.55 
 
 
1123 aa  205  3e-51  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  35.06 
 
 
767 aa  201  3.9999999999999996e-50  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
567 aa  201  5e-50  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  34.54 
 
 
797 aa  195  3e-48  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  26.81 
 
 
755 aa  193  1e-47  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
586 aa  193  1e-47  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  27.93 
 
 
733 aa  193  1e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
566 aa  192  2e-47  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  34.02 
 
 
705 aa  192  2e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
793 aa  191  4e-47  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  27.49 
 
 
752 aa  191  5e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  32.12 
 
 
843 aa  191  5e-47  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  37.19 
 
 
553 aa  191  5e-47  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
583 aa  190  8e-47  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_009832  Spro_1415  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
546 aa  190  1e-46  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  37.19 
 
 
553 aa  189  1e-46  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  37.19 
 
 
553 aa  189  1e-46  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  37.19 
 
 
553 aa  190  1e-46  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  33.92 
 
 
775 aa  188  3e-46  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  35.79 
 
 
792 aa  187  7e-46  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  37.54 
 
 
562 aa  187  9e-46  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  34.95 
 
 
652 aa  186  1.0000000000000001e-45  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2091  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
656 aa  186  1.0000000000000001e-45  Shewanella sp. MR-4  Bacteria  normal  normal  0.684691 
 
 
-
 
NC_008322  Shewmr7_1883  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
656 aa  186  1.0000000000000001e-45  Shewanella sp. MR-7  Bacteria  normal  normal  0.113479 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  33.33 
 
 
753 aa  186  1.0000000000000001e-45  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
587 aa  185  3e-45  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  32.8 
 
 
678 aa  185  3e-45  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
586 aa  185  3e-45  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_004347  SO_2123  methyl-accepting chemotaxis protein  31.58 
 
 
654 aa  184  4.0000000000000006e-45  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
519 aa  184  4.0000000000000006e-45  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  33.43 
 
 
679 aa  184  5.0000000000000004e-45  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
580 aa  184  6e-45  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0729  PAS  34.28 
 
 
945 aa  184  7e-45  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  37.63 
 
 
557 aa  184  7e-45  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  35.6 
 
 
679 aa  184  7e-45  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  37.62 
 
 
547 aa  184  8.000000000000001e-45  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3400  methyl-accepting chemotaxis sensory transducer  37.62 
 
 
547 aa  184  8.000000000000001e-45  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.779493 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  28.51 
 
 
740 aa  184  8.000000000000001e-45  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
547 aa  183  9.000000000000001e-45  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  37.62 
 
 
547 aa  184  9.000000000000001e-45  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
CP001509  ECD_01857  methyl-accepting chemotaxis protein II  38.55 
 
 
553 aa  183  1e-44  Escherichia coli BL21(DE3)  Bacteria  normal  0.13191  n/a   
 
 
-
 
CP001637  EcDH1_1754  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
553 aa  183  1e-44  Escherichia coli DH1  Bacteria  normal  0.0705276  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  35.02 
 
 
584 aa  183  1e-44  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  28.21 
 
 
691 aa  183  1e-44  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_011353  ECH74115_2624  methyl-accepting chemotaxis protein II  38.55 
 
 
553 aa  183  1e-44  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.784316  hitchhiker  0.00000000183949 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
561 aa  183  1e-44  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_01846  hypothetical protein  38.55 
 
 
553 aa  183  1e-44  Escherichia coli BL21  Bacteria  normal  0.186429  n/a   
 
 
-
 
NC_009800  EcHS_A1982  methyl-accepting chemotaxis protein II  38.55 
 
 
553 aa  183  1e-44  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  37.63 
 
 
557 aa  183  1e-44  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2119  methyl-accepting chemotaxis protein II  38.55 
 
 
553 aa  183  1e-44  Escherichia coli E24377A  Bacteria  normal  0.0158521  n/a   
 
 
-
 
NC_010468  EcolC_1746  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
553 aa  183  1e-44  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  37.63 
 
 
557 aa  183  1e-44  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A3335  methyl-accepting chemotaxis sensory transducer  37.62 
 
 
547 aa  182  2e-44  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.499063 
 
 
-
 
NC_010512  Bcenmc03_6305  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
528 aa  182  2e-44  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  38.55 
 
 
553 aa  182  2e-44  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_008062  Bcen_6464  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
528 aa  182  2e-44  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6699  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
528 aa  182  2e-44  Burkholderia cenocepacia HI2424  Bacteria  normal  0.971949  normal  0.6752 
 
 
-
 
NC_011149  SeAg_B3779  methyl-accepting chemotaxis protein  34.08 
 
 
547 aa  182  2.9999999999999997e-44  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  36.45 
 
 
548 aa  182  2.9999999999999997e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
561 aa  182  2.9999999999999997e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_007953  Bxe_C0913  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
514 aa  182  2.9999999999999997e-44  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00710557  normal  0.212573 
 
 
-
 
NC_008577  Shewana3_2216  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
657 aa  182  2.9999999999999997e-44  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  33.13 
 
 
610 aa  182  2.9999999999999997e-44  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  37.81 
 
 
630 aa  181  4e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5413  methyl-accepting chemotaxis sensory transducer  37.01 
 
 
464 aa  181  4e-44  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.723957 
 
 
-
 
NC_007953  Bxe_C0612  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
539 aa  181  4e-44  Burkholderia xenovorans LB400  Bacteria  normal  0.60428  normal  0.0897253 
 
 
-
 
NC_011094  SeSA_A3769  methyl-accepting chemotaxis protein I  34.08 
 
 
547 aa  181  4e-44  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3889  methyl-accepting chemotaxis protein I  34.08 
 
 
547 aa  181  4e-44  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_1380  methyl-accepting chemotaxis sensory transducer  38.22 
 
 
715 aa  181  4.999999999999999e-44  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
555 aa  181  4.999999999999999e-44  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_012880  Dd703_3560  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
538 aa  181  5.999999999999999e-44  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  28.7 
 
 
706 aa  181  5.999999999999999e-44  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
545 aa  181  7e-44  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  37.63 
 
 
547 aa  180  8e-44  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  36.64 
 
 
558 aa  180  8e-44  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3580  methyl-accepting chemotaxis sensory transducer  35.29 
 
 
572 aa  180  8e-44  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3846  methyl-accepting chemotaxis protein I  34.08 
 
 
547 aa  180  9e-44  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
513 aa  180  9e-44  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
552 aa  180  9e-44  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1420  methyl-accepting chemotaxis sensory transducer  36.01 
 
 
616 aa  180  9e-44  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000000000000145979  n/a   
 
 
-
 
NC_009665  Shew185_2245  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
664 aa  180  9e-44  Shewanella baltica OS185  Bacteria  normal  0.232427  n/a   
 
 
-
 
NC_009997  Sbal195_2362  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
664 aa  180  1e-43  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  32.51 
 
 
575 aa  180  1e-43  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012848  Rleg_5166  methyl-accepting chemotaxis sensory transducer  33.14 
 
 
669 aa  180  1e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  36.26 
 
 
573 aa  180  1e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_011989  Avi_0793  methyl-accepting chemotaxis protein  33.64 
 
 
740 aa  179  1e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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