| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0027 |
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| Symbol | |
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| ID | 3760353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 31218 |
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| End bp | 34097 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637784733 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_390298 |
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| Protein GI | 78484373 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGATA ATAAAATCAA CCTAAGATTC ATTGTCAAAG TTGATAAACA GAATCGAATT
AATTTTATCA ATAACGAGTA TGCGGATTGG CTTGATTATA AGCCGGATGA GTTATTGAAA
AAATCTACCA GTGTGTTTCT TGTGGATGAA ACGCCAGAAG TGGTTCAAAA AAATATTGAT
GAAGAGGTTT ATCGCGGAAG AGCTGTCAGT TTAGCCGTTA AAGAGAAGAA GAAAAACGGT
GAAACGTTCT GGGTTGATAT TCGTATTCAA CCGGTTATGG AAGCGGATGA ATATCAAGGT
TATACATCAA TCAAACAGTT GATATTACAA GAAGACCGTA TTGCAGAGCT GGAAAAGACT
TACCAAGACA TCAAAAAAGG TAAAAAAACG TTGATCAAAG GTGACGTTGT GAACTGCCAT
CGTCATCGAT TCAATAAATG GTTTCGTTTA AATAAATTAA ATATTGTTCA TAAAGTATTA
GCCGCTGTTG TTTTGACCGC GGCATTTTTA TTGTCACTTG CCTATATTTA TGAAAATGAA
CAAAAAGATT TTATCTTTAA TGAGGTGATC AGTGACCAGT CTGGCAATAT CCAAGATATG
GTTGATACGT ATTTTAATAA TAAACTGGAT ATTGGTGAGG CGGCTTTAGC CGGCATTTTG
AAAATGCCAG GTTTTGCTGA AGCCTTTGCT CAAAAAGATA TGGCTAGCTT AAATGTGATG
TTGGGAGGCT TAGATCCTTA TTTTGCTAAG AACAGTAATA ACAAAGGCGT TAAGTTACAG
TTAGTTGATC GTAACGGTAT GTCTTTTTAT CGTAGTTGGG CTAAACAGCA TAAACAGTTT
GATGTTTCTT GGCGTCAGGA TGTAGCTTAT CAAAATAAAT CTCCGGGATT ACATCGTACG
TATTCAATTG GAAAAATGGC TTTGACACTT AAAAACCATA TTCCAATTTA TGACGCTAAT
GACCAATATT TAGGGTCTGC GATCCTAATA CAAGGGTTGG GTTCTGTCCA CAAAGCTTTG
TTATCTAAAA ATATCGTCTT TATTACCGCC GTTAAAAAAT CGTACTTAAC GAAAAGAAAC
CAGGAAGTGG CGAAGTTTCC CTCGGTGTTC AATGATAATA AGTTAGTTTT ATCTTCTAAA
AAGCATTATG AAACAGATAG AGGACGTCAG CTTGTAAAAG ATTTGCAAGC CATGTCTAGT
CAAACCTTAT TGGAAAAGGG CTATGTTCTA GACGATAGAT ATCTTCATAT TGCACTGCCG
TTGAAAGATG AAAAGCAAAA CGTAATGGGC TATATCATTG CTTCTCAAAC GATTAATAAA
TTCATTAAGA CATTAAATCA TCGTTATCAA GCCGCGGAAG ACACAACAAC GGCGATTTTA
ATTACTTTCA TTATCGTCAC CATTCTTTTA ATGATTATTT TGCAATATGT TGTCATTCGT
CCACTGCGTA AAGCAGAAAG AACGATGCAG ACGGCTGTTA AAAATTCAGA TTTGTTTGCT
CGTTTGTCTA ACTACGGTGA AGATGAAATT GCAAAGTTGG GCTATGCCTA TAATCAACAG
GCCATGCTAT CTCAAGTCGC AATTTCTGAA ATTAACACCG CCATGGAAGA AATTGTGGCG
GGTCGTTTGA ACCACCAAGT GACTTTCCCG TTTGAATCGG ATTATGGGTT ATTAAAAGAC
CGCATGAACG AAACATCGCA GAGTTTAAAA AACACTTTTG CCGCAATTGC AGATGTCATG
AATGATTTGA AAATGGGTCA TTTTGATGCT CAAAGTAATG CCTCTTTGCA AGGTGCTTAT
GCTGAAGTGG TAGAGGATTG TTTAAGTGCG ATGCACGATT TGAATGTGAT TTTTTCCGAT
ATCTCACGGG TAATGGAATT GGCTGCGAAA GGAAAATTTG ATGAATTCAT TCATGTGGCC
GCAGAAGGCG ATGTGAAACG CTTGATAGAA ACTCTAAATT CAACATTAAA ACAGCTGGAC
GCTGGTTTTA GTGACGTTAT CAGTGCTGCA CAACGTTTGG CCAAAGGCGA TTTAACCCAG
CCGATTGAAA CGGATTATGA ATATAAAATT GGAGAAGCCA AAGAGGCCAT TAATAAATCC
ATGTCCGGGC TGGGCGTTGC GCTATCGAAA ATCTTAGAAA TCACCAACCA GTTGTCTTTG
GATGTGAGCA CGGTGAATGA AGGCACGCAA AGCTTGAATA GCCGAACGCA GGAGCAGGCG
GCTTCGTTGG AAGAAACGTC TTCGGCAATG GAACAAACCG CCGCTCAGAC CCGAAGTAAC
TTGGATCATA CACAAGAAGT GAATCGCATT ACGGAAAAAC AAAGTGGATT GTTAACGGAT
GCGAATAAAG TTATGGTGGA TACTCAACAC TCAATGGGCA GTATTGAGCA AGCGTCTAAC
CAGATTAAAG AAATCACCAC GTTAATTGAT TCCATTGCTT TTCAAACCAA CTTATTGGCA
TTAAATGCCG CGGTGGAAGC CGCTCGAGCA GGCGATCATG GACGAGGGTT CGCCGTGGTT
GCAGGAGAGG TTAGAAATTT AGCTGGCAAA TCTGCCGATG CCGCCAAGCA AATTGGTAAA
CTGGTTGAAA ACACTTCAGA AGCTATTGCG GTTGGTGCGA ACCAGGTAGA AGAAGTGGCG
CAATCACTTA ACAACATTAC CAATGAAACG CTTAAAGTCA GAGAATTGGT TGAAAATGTG
ACGCGCGCCT CTAAAGAGCA GTCCCATGGG ATTGATGAAG TCAATAAAGC GATTACAACG
ATTGATGGTG TGACACAGCA AAATGCCGCC TTAGTGGAAG AGACAACCGC CACAACCGAG
TCCATGAATC GCTCAGCGGA AGAATTGATG GATGCTGTCA ACGCCTTTAA AATAAAGTAG
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| Protein sequence | MVDNKINLRF IVKVDKQNRI NFINNEYADW LDYKPDELLK KSTSVFLVDE TPEVVQKNID
EEVYRGRAVS LAVKEKKKNG ETFWVDIRIQ PVMEADEYQG YTSIKQLILQ EDRIAELEKT
YQDIKKGKKT LIKGDVVNCH RHRFNKWFRL NKLNIVHKVL AAVVLTAAFL LSLAYIYENE
QKDFIFNEVI SDQSGNIQDM VDTYFNNKLD IGEAALAGIL KMPGFAEAFA QKDMASLNVM
LGGLDPYFAK NSNNKGVKLQ LVDRNGMSFY RSWAKQHKQF DVSWRQDVAY QNKSPGLHRT
YSIGKMALTL KNHIPIYDAN DQYLGSAILI QGLGSVHKAL LSKNIVFITA VKKSYLTKRN
QEVAKFPSVF NDNKLVLSSK KHYETDRGRQ LVKDLQAMSS QTLLEKGYVL DDRYLHIALP
LKDEKQNVMG YIIASQTINK FIKTLNHRYQ AAEDTTTAIL ITFIIVTILL MIILQYVVIR
PLRKAERTMQ TAVKNSDLFA RLSNYGEDEI AKLGYAYNQQ AMLSQVAISE INTAMEEIVA
GRLNHQVTFP FESDYGLLKD RMNETSQSLK NTFAAIADVM NDLKMGHFDA QSNASLQGAY
AEVVEDCLSA MHDLNVIFSD ISRVMELAAK GKFDEFIHVA AEGDVKRLIE TLNSTLKQLD
AGFSDVISAA QRLAKGDLTQ PIETDYEYKI GEAKEAINKS MSGLGVALSK ILEITNQLSL
DVSTVNEGTQ SLNSRTQEQA ASLEETSSAM EQTAAQTRSN LDHTQEVNRI TEKQSGLLTD
ANKVMVDTQH SMGSIEQASN QIKEITTLID SIAFQTNLLA LNAAVEAARA GDHGRGFAVV
AGEVRNLAGK SADAAKQIGK LVENTSEAIA VGANQVEEVA QSLNNITNET LKVRELVENV
TRASKEQSHG IDEVNKAITT IDGVTQQNAA LVEETTATTE SMNRSAEELM DAVNAFKIK
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