Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3786 |
Symbol | |
ID | 5749369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4164411 |
End bp | 4166243 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298885 |
Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
Protein accession | YP_001564803 |
Protein GI | 160899221 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0254049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.3858 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAGT CCCTGCGTGC GCGACTCATC GCGCTCAGCG TGGCCATCGT CACCGTGGCC ATGCTGGCCC TGGCCATTGC CAACTTCCTC ACGGTGCAGC GCCATGTGCT GTCCACCCTC GACGACCAGA GCCGCCAGCT CGTGAACGCC CAGGCCCAGG TACTGGGCGA ATGGGTGGCG ACCAAGCGCC TGCTGACCCA TACCCTGGCG CAGGCGGTCG ATACGCCGGA GCCGCGTGCC GTGGTCCAGG CTCTGCGCGA CGGCGGCGGC TTCTCGGATG CCTACTTCGG CTACACCGAC AAGCGCATGT TCTTCCTCAA CGAGATGGCT GCCGACTACG ACGTGACGGC CCGCCCCTGG TTCAGGCAGG CGCTCAAGGA AGGCCGCCCC ATCGTGACGG CGCCCTATCT GTTTGTCTCT CCGCCCGAAG TGGGCGTGAC CTTTGCCGAG CCCGTGGGCC CTGCCGGCAA TCCCGTCGCC GTGGTCGGCA CCGACGTGCT GCTCACCACC GTGGTGCGCA CCGTGGGCGC CATCCGGCCC ACGCCGGGCA GCTTTGCCTT CTTGGTGGAT GAGGCGGGCG CCATCGTCAC CCACCCCGAT CCGGCACTCA CGCTCAAGCC CGTCTCCGCG CTCTCGCCCC AGTTGCGTGC CGACGCAATC CAGGCCCTGC CCAAGGCGGA CTCCGGCATG CGCACGGCCG TCGGCGGCAA GGACTTCCTG CTCTACGGCC AGGGCGTGCC CGGCACGAAC TGGCAACTGG TGGTGGCCGT GCAGCGCGAC GAGGCGCTGT CCGCGCTGGG TTCGCTGCTC AAGGTGTCGG GCGCCATCGT TGCCATTTCG CTGATCCTGG CGATTGCGCT GCTGGGCGCC GTCATCGCCC GCGTCACGCG CCGGCTGGCC GTGGTGCGCG ATGCGCTGGA AGACATCGCC TCGGGTGACG GCGATCTCAC GCGCCGCCTG TCGGTGCAAG GCAACGACGA ACTGACGCAG ATCGCACGCG CGTTCAACCA CTTCACCGAC AAGATCGCCT CGGTGCTGGT GCGCATCCGG GAATCGTCCG AGACCGTGCG CCATGCTTCC ACCGAAATCG CCAGCGGCAA CCAGGATCTG TCGGCACGCA CCGAGCAGCA GGCCAGTTCG CTGGAGGAAA CGGCTGCCGC CATGGAGCAG CTCACTGCCA CCGTGCAGCA CAACGCCGAG AATGCGCGCC AGGCGCGCCA GCTGGCCAGC AGCGCCTCGG ACATCGCCAC GCATGGCGGC ACCGTGGTGG ACCAGGTGGT TCGCACCATG GGCGGCATCG AGCAGTCCTC GCACCGCATT GCCGACATCA TCGGCGTGAT CGACTCCATT GCCTTCCAGA CCAACATCCT GGCGCTGAAC GCCGCCGTGG AAGCGGCCCG TGCCGGTGAG CAGGGCCGGG GCTTTGCCGT GGTGGCCTCC GAGGTGCGCA CGCTGGCCCA GCGCAGCGCC ACGGCCGCCA AGGAAATCAA GGCGCTGATC GACGACTCCG TGGGCCAGGT CGATGCCGGC AGCCGCCTGG TGCAGGACGC GGGCGCCACC ATGGGCAAGG TGGTGGAAAG CGTGCAGCGC GTGACCGCCA TCGTCACCGA GATCAGCAAT GCCAGCCAGG AACAGAGCAC GGGCATTGCC GAAATCGGGA CCGCCGTCAG CCAGATGGAC CAGTCCACCC AGCAGAACGC GGCCCTGGTC GAAGAGGCCA CGGCCGCGGC GCAGTCGCTG CAGCAGCAGG CCGCGCAACT GGCGGACGTG GTGGCAGGCT TTCGGCTGGA CAGCGAATCA TCCCGGTCCA GAAGCATCGC CCTGCATAGG TGA
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Protein sequence | MFQSLRARLI ALSVAIVTVA MLALAIANFL TVQRHVLSTL DDQSRQLVNA QAQVLGEWVA TKRLLTHTLA QAVDTPEPRA VVQALRDGGG FSDAYFGYTD KRMFFLNEMA ADYDVTARPW FRQALKEGRP IVTAPYLFVS PPEVGVTFAE PVGPAGNPVA VVGTDVLLTT VVRTVGAIRP TPGSFAFLVD EAGAIVTHPD PALTLKPVSA LSPQLRADAI QALPKADSGM RTAVGGKDFL LYGQGVPGTN WQLVVAVQRD EALSALGSLL KVSGAIVAIS LILAIALLGA VIARVTRRLA VVRDALEDIA SGDGDLTRRL SVQGNDELTQ IARAFNHFTD KIASVLVRIR ESSETVRHAS TEIASGNQDL SARTEQQASS LEETAAAMEQ LTATVQHNAE NARQARQLAS SASDIATHGG TVVDQVVRTM GGIEQSSHRI ADIIGVIDSI AFQTNILALN AAVEAARAGE QGRGFAVVAS EVRTLAQRSA TAAKEIKALI DDSVGQVDAG SRLVQDAGAT MGKVVESVQR VTAIVTEISN ASQEQSTGIA EIGTAVSQMD QSTQQNAALV EEATAAAQSL QQQAAQLADV VAGFRLDSES SRSRSIALHR
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