More than 300 homologs were found in PanDaTox collection
for query gene Snas_3404 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013947  Snas_3404  transcriptional regulator, LuxR family  100 
 
 		 427 aa  833    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.226025  normal  0.0787607 
 
 
-
 
NC_013739  Cwoe_3331  transcriptional regulator, LuxR family  49.21 
 
 		 429 aa  289  7e-77  Conexibacter woesei DSM 14684  Bacteria  normal  0.573332  normal  0.222542 
 
 
-
 
NC_008541  Arth_3710  LuxR family transcriptional regulator  39.39 
 
 		 426 aa  239  8e-62  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_0091  regulatory protein LuxR  38.22 
 
 		 410 aa  213  5.999999999999999e-54  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2842  transcriptional regulator, LuxR family  37.11 
 
 		 492 aa  135  9.999999999999999e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  57.14 
 
 		 227 aa  71.6  0.00000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  57.14 
 
 		 219 aa  70.5  0.00000000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_3072  two component LuxR family transcriptional regulator  50 
 
 		 209 aa  69.7  0.00000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  0.875677  normal  1 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  57.14 
 
 		 237 aa  67.8  0.0000000003  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  49.46 
 
 		 213 aa  67.4  0.0000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  53.97 
 
 		 212 aa  67  0.0000000006  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  55.22 
 
 		 234 aa  66.6  0.0000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  55.56 
 
 		 237 aa  67  0.0000000007  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  61.02 
 
 		 253 aa  66.6  0.0000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_17000  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  59.32 
 
 		 233 aa  66.6  0.0000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.523967 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  64.91 
 
 		 236 aa  66.6  0.0000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  50 
 
 		 206 aa  66.6  0.0000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  53.03 
 
 		 217 aa  66.6  0.0000000008  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_0145  LuxR family transcriptional regulator  50 
 
 		 454 aa  66.2  0.0000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  33.53 
 
 		 226 aa  66.2  0.000000001  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  50.65 
 
 		 242 aa  66.2  0.000000001  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  56.06 
 
 		 220 aa  65.9  0.000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  42.39 
 
 		 218 aa  66.2  0.000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  59.32 
 
 		 303 aa  66.2  0.000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  50.72 
 
 		 229 aa  65.5  0.000000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  53.45 
 
 		 209 aa  65.9  0.000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  53.45 
 
 		 209 aa  65.9  0.000000002  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0858473 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.97 
 
 		 226 aa  65.5  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  54.17 
 
 		 229 aa  65.5  0.000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  36.05 
 
 		 207 aa  65.1  0.000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_2711  transcriptional regulator NarP  55 
 
 		 210 aa  65.1  0.000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.281479  n/a   
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  53.45 
 
 		 209 aa  65.5  0.000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  49.3 
 
 		 224 aa  65.1  0.000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009511  Swit_4199  regulatory protein, LuxR  57.14 
 
 		 855 aa  65.1  0.000000002  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.142655 
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  55.17 
 
 		 210 aa  65.1  0.000000002  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal  1 
 
 
-
 
NC_012917  PC1_2406  transcriptional regulator NarP  55 
 
 		 210 aa  64.7  0.000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  50 
 
 		 214 aa  64.7  0.000000003  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  47.89 
 
 		 219 aa  64.7  0.000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  54.69 
 
 		 225 aa  64.7  0.000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  55.22 
 
 		 234 aa  64.7  0.000000003  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_008726  Mvan_3766  response regulator receiver protein  47.5 
 
 		 539 aa  64.7  0.000000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.484632  normal  0.834357 
 
 
-
 
NC_004347  SO_3982  DNA-binding nitrate/nitrite response regulator  60.38 
 
 		 209 aa  64.3  0.000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3836  two component LuxR family transcriptional regulator  57.14 
 
 		 209 aa  64.3  0.000000004  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000136397  normal  0.0231387 
 
 
-
 
NC_011663  Sbal223_3654  two component transcriptional regulator, LuxR family  57.14 
 
 		 209 aa  64.3  0.000000004  Shewanella baltica OS223  Bacteria  unclonable  0.000000000464283  hitchhiker  0.00000781977 
 
 
-
 
NC_013526  Tter_2446  transcriptional regulator, LuxR family  56.67 
 
 		 188 aa  64.3  0.000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  46.75 
 
 		 204 aa  64.3  0.000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  50 
 
 		 215 aa  64.3  0.000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_0792  two component LuxR family transcriptional regulator  57.14 
 
 		 209 aa  64.3  0.000000004  Shewanella baltica OS155  Bacteria  hitchhiker  0.000000151034  n/a   
 
 
-
 
NC_009665  Shew185_3713  two component LuxR family transcriptional regulator  57.14 
 
 		 209 aa  64.3  0.000000004  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000000161759  n/a   
 
 
-
 
NC_008321  Shewmr4_0657  two component LuxR family transcriptional regulator  57.14 
 
 		 209 aa  63.9  0.000000005  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000493749  normal  0.229808 
 
 
-
 
NC_008322  Shewmr7_3365  two component LuxR family transcriptional regulator  57.14 
 
 		 209 aa  63.9  0.000000005  Shewanella sp. MR-7  Bacteria  hitchhiker  0.0000651556  normal  0.0242167 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  50 
 
 		 218 aa  63.9  0.000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_0656  two component LuxR family transcriptional regulator  57.14 
 
 		 209 aa  63.9  0.000000005  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000830399  normal  0.140804 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.33 
 
 		 227 aa  63.9  0.000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_008700  Sama_0646  response regulator receiver protein  60.38 
 
 		 209 aa  63.9  0.000000005  Shewanella amazonensis SB2B  Bacteria  normal  0.0492071  normal  1 
 
 
-
 
NC_009438  Sputcn32_0683  two component LuxR family transcriptional regulator  57.14 
 
 		 209 aa  63.9  0.000000005  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000000000388278  n/a   
 
 
-
 
NC_009972  Haur_4485  two component LuxR family transcriptional regulator  49.25 
 
 		 213 aa  63.9  0.000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.310872  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  51.43 
 
 		 222 aa  63.5  0.000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  58.62 
 
 		 241 aa  63.5  0.000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_008025  Dgeo_1496  LuxR family transcriptional regulator  62.75 
 
 		 197 aa  63.5  0.000000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  52.46 
 
 		 216 aa  63.5  0.000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  57.89 
 
 		 223 aa  63.2  0.000000008  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1228  LuxR family transcriptional regulator  50.79 
 
 		 204 aa  63.2  0.000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.118696  normal  1 
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  57.89 
 
 		 223 aa  63.2  0.000000008  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_0620  two component transcriptional regulator, LuxR family protein  57.14 
 
 		 209 aa  63.2  0.000000009  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000275655  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  49.32 
 
 		 226 aa  63.2  0.000000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  50.75 
 
 		 218 aa  62.8  0.00000001  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  57.14 
 
 		 209 aa  63.2  0.00000001  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  48.48 
 
 		 225 aa  62.4  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  60 
 
 		 213 aa  62.4  0.00000001  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_009972  Haur_4091  LuxR family transcriptional regulator  43.3 
 
 		 191 aa  62.8  0.00000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0720604  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  40.48 
 
 		 217 aa  62.8  0.00000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  35.48 
 
 		 215 aa  63.2  0.00000001  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  53.23 
 
 		 209 aa  62.8  0.00000001  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal  1 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  56.67 
 
 		 217 aa  62.8  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  49.32 
 
 		 220 aa  62  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  50.77 
 
 		 211 aa  62.4  0.00000002  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1869  two component LuxR family transcriptional regulator  43.48 
 
 		 231 aa  62  0.00000002  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  50 
 
 		 223 aa  62  0.00000002  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  50 
 
 		 221 aa  62.4  0.00000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  45.07 
 
 		 226 aa  61.6  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  1  hitchhiker  0.00432991 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  52.24 
 
 		 215 aa  62  0.00000002  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  52.54 
 
 		 218 aa  62  0.00000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  46.43 
 
 		 214 aa  62  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.749326 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  33.09 
 
 		 227 aa  61.6  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  47.89 
 
 		 224 aa  62  0.00000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_16860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.89 
 
 		 258 aa  62  0.00000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.85724  normal  0.036031 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  46.67 
 
 		 235 aa  61.2  0.00000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_013235  Namu_0765  two component transcriptional regulator, LuxR family  52.46 
 
 		 222 aa  61.6  0.00000003  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  51.56 
 
 		 207 aa  61.2  0.00000003  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.296562 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  50 
 
 		 221 aa  61.2  0.00000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  47.83 
 
 		 223 aa  61.6  0.00000003  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  44.29 
 
 		 220 aa  61.2  0.00000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_1466  two component transcriptional regulator, LuxR family  55.17 
 
 		 215 aa  60.8  0.00000004  Escherichia coli DH1  Bacteria  normal  0.25338  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  49.33 
 
 		 239 aa  60.8  0.00000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  35.16 
 
 		 213 aa  61.2  0.00000004  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  52.86 
 
 		 215 aa  60.8  0.00000004  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  50.82 
 
 		 216 aa  60.8  0.00000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  53.97 
 
 		 221 aa  61.2  0.00000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0403461 
 
 
-
 
NC_010468  EcolC_1457  transcriptional regulator NarP  55.17 
 
 		 215 aa  60.8  0.00000005  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.956805 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>