| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3404 |
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| Symbol | |
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| ID | 8884603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3607206 |
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| End bp | 3608489 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003512161 |
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| Protein GI | 291300883 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.226025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0787607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC CCGATCAGCC GCTGGCCGCC GTCTTCACCG TGCTCAACGG GCCCCTGGAC
CAGCTGCTGG GCCGGTTCTC CGCGCTGCTG CGGGACCTGG TTCCGCACGA GGCGCTGGCG
ATGCTGACCG GCGACTGCTC CCGCAACCCG CTCATCACCC ACGGCGATCC CGCCGTGGCC
GAGCGCGTCG TCACCGCCGA GCTCAACCAG CTGGGCGCCG TCACCGGGGT GACCCGGCCG
TGGTGGGGAC AGGCGAAACT GGCCGGGCGC ACCCGTCCGG TGCTGGCGGT GGCGTCCCAT
CCCCGGGGTT CGGCGGGCGC GCTGCTGGCG GTCGCGGCCC ACGAGCCGCG ACCCAGCACC
GAGGTTCTGG CCACCGTGCA GTCGATGTGG GATCTGATCA CGCTGCACGT GGCCGACCGG
GCCGGGGACG TCGAGTCGCC GCAGCTGGTC ATGACCCATC GGCTCGTCGC CGAGGAACGC
GCCCGGGTGG TGACCGAGCT GACCGAGTCG CATTCGGCCA CGATCGTGTC GCTGCTGGCG
GCGTTGCGGT CGAGGACACT GAGCGACACC GCCGCCCGGC AGGTCGCGAC CGACCTGGCC
GTCAACGCGT TGATCGACCT GCGCACCACC GGCGACTGGG ACCGGGTGAT CAGTCAGGAG
GTCGCCGAGG ACGCGTTCAC GCGGCTGGCC GACCGGTTGC GTCCACTGTC GCGTTACGGC
GATGTCGAGC TGGAACTGGT GCCGCCCAGC CAGTCCCAGC GGGAGCTGCC GGGTCAGGTG
GCGCGGGTCG CGCGGACGAT GTCGCGGGCG GTGGTGCTGG TGCTGCTGGA GCAGGGCGGT
GTCGGCCGGG TACGGATCAC CTGGGACGCG GGCGATGCCG CGCTGCGCAT CACGATCCGC
GACGACGGTT CCGGGCACGT TCCCCGTCGG GCGCTGGAAT CGTTGCGCAC CAACGATCGA
CTGGGCCCGC TGTCGGGGAC CTTCACCGTG GACGCGGTTC CCGGCTGGGG TACCGCGGTG
ACGATCACCG TGCCGCTGGC GGTGCCGTCG GCGACTCGTC CGGCGCCGCT GCCGGAGCTG
AACCCGCGCG AGCTGGACGT CCTGGCGAAG CTGGCCGGCG GCTTGCGCAA CCGTCGCATC
GCCGAAGAGT TGCACATCAG TGAGAACACC GTGAAGTTCC ACGTCGGCAA CATCCTGCAA
AAACTCGGTG TGGCCTCCCG CAACGAGGCC GCGGTGCTGG CGCGCGACGC GGGCATCGAC
GCCGCGACGG TCAGCGCGGG CTAG
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| Protein sequence | MTTPDQPLAA VFTVLNGPLD QLLGRFSALL RDLVPHEALA MLTGDCSRNP LITHGDPAVA
ERVVTAELNQ LGAVTGVTRP WWGQAKLAGR TRPVLAVASH PRGSAGALLA VAAHEPRPST
EVLATVQSMW DLITLHVADR AGDVESPQLV MTHRLVAEER ARVVTELTES HSATIVSLLA
ALRSRTLSDT AARQVATDLA VNALIDLRTT GDWDRVISQE VAEDAFTRLA DRLRPLSRYG
DVELELVPPS QSQRELPGQV ARVARTMSRA VVLVLLEQGG VGRVRITWDA GDAALRITIR
DDGSGHVPRR ALESLRTNDR LGPLSGTFTV DAVPGWGTAV TITVPLAVPS ATRPAPLPEL
NPRELDVLAK LAGGLRNRRI AEELHISENT VKFHVGNILQ KLGVASRNEA AVLARDAGID
AATVSAG
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