Gene Sked_17000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17000 
Symbol 
ID8633336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1896938 
End bp1897639 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content74% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003314461 
Protein GI269795006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.523967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGGG TGCTGCTGGC CGACGACCAC GCCGCCGTGC GCGCGGGGCT GAGGTTCCTG 
CTCGAGTCGG CGGCGGACCT CCAGGTGGTC GCCGAGGTCG GTGACGGGGC GAGCGCCGTC
GAGCGCGCCC GTGCGCTGCG GCCCGACGTC GTGCTCATGG ACGTCCGGAT GCCCGGGACG
GACGGCATCA CCGCCACAGC AGCCATCACC GCGGAGGGGC TCGCCGAGGT GCTGGTCCTG
ACGACCTTCG ACCTCGACGA CTACGTCACC GGTGCGCTGG GTGCGGGCGC CGCGGGGTAC
CTGCTCAAGT CGGCCGAGCC GCACGAGCTC CTCGACGCCG TCCGCCGTGT CGCCGACGGC
GACGGCGTCC TCGCCCCCGA GGTCACGCGC CGGGTCATCC GGGCACTCGC GGCGGCGGCG
CCCGCGTCGA CTACCCCGCC CGCATCCACG CCCCCGAGCG AGCCCGAGCC CGCGAAGGTC
ACCCGTGTCG CGGGCCTCAC CCCACGCGAG CGGGACGTCC TGGCCGCCCT CGGGCGCGGT
CTGACCAACC AGCAGATCGC CACCGAGCTG TTCGTCAGTG CCGCGACCGC CAAGACGCAC
GTGTCACGGG TCCTCATGAA GCTCGGGGTG ACCTCGCGCG TGCAGGCGGC GCTGGTGGCA
CGGGACGCGG GGGAGCACCT GAGAGGATCG TCAGGTGCAT GA
 
Protein sequence
MIRVLLADDH AAVRAGLRFL LESAADLQVV AEVGDGASAV ERARALRPDV VLMDVRMPGT 
DGITATAAIT AEGLAEVLVL TTFDLDDYVT GALGAGAAGY LLKSAEPHEL LDAVRRVADG
DGVLAPEVTR RVIRALAAAA PASTTPPAST PPSEPEPAKV TRVAGLTPRE RDVLAALGRG
LTNQQIATEL FVSAATAKTH VSRVLMKLGV TSRVQAALVA RDAGEHLRGS SGA