| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_2842 |
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| Symbol | |
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| ID | 8327031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 3273281 |
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| End bp | 3274759 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644943376 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003100617 |
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| Protein GI | 256376957 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACCGG TCGAGCTGTT CTTCAGAGCC GTGGACCTGC TGGACGCCCC CGAGGGGCGG
CACCTGGAGG CCTGCTCGAC CGCGATAGCC GGGCTGGTCC CGCACCGGGC GCTGGTCGAG
CTGAGCGCCT CCCTCCCGCC CATCCGGGTG GTCGGCGATC CCGAGACCAA GGCCGCGTTC
ACCCCCGTCG TGCTGGCCGA CCTCCTCGAG TCCGCGAGCG CCGAACCGCT GTGGCGCGGC
GGGACCACCG CGGGCGGGCG GCCGTACCGG GTGAGCGTGC TGCGAGCTGA ACCCAAACGG
GGGACCGCCT CGGTGCTCGT GCTCGTGCAC GACCCGGAGG TAGTCTTGGA CGAGAACGAG
GAACTCGCAG CCCTCCAGGT CGTCAGCGCG CTGTGGCGGC TCCTCGCGAC TCACCGCGCG
GCCACCCGTC GCGCCGGTCG CGCCGCGCCC ATGCCCATGC CCACGGAGAT TCCGAACGCC
TTGGGTACTC CGAACGCCTC GGGTACTCCG AACACCCTGG GCACTCGGAA CGCCCTGGGG
ACTCCGAACG CCCTGGGGAC TCGAGACGTC CTGGGCACTC CGAACGCCCC AGGCGCCTCG
GACGACGAGC CCTACTCGGC CAAGCTCGCC GCCGCTGCGG GCGCGCAGGT CGCCGCCGAG
CTGGTGCAGC GGCAGTCCGC GCTGGTCAAA GCCATGCTCG TGGCGCTGCG CTCGTCCCGC
TACGACGACC GGCAGGCCCG CTCCGAGGCG ACCGGCCTCG CGATGGGCGC GCTGCTCGAC
CTGCGGGCCG AGGAGCAGGT GCGGCGCGGG TTGTCCGGCG AACCGGTCGG CGAGGCGTTC
GCCGCGCTGG TCAAGGACCT GGAACCGGTG GTGCGGCGGG CCGGGGTGCG CCTGGAGGTG
GACGAGCCGG GTGACGGCGG TGACGTACCG CTGGAGCTGG CCGGGCTCGC CGCCGCCGTC
AGCACCGAGG TCGTGCTGCT CGCGCTGGAC CGGGACGCGG TCACCTCGCT GCGCGTGGGC
TGGCAGGTCG GCGAGGAGCT GGTGCTGCGC GTGCGCGACA ACGCGACCAG CGGGTTCGAC
CCCGCCGGGG TGCGCGCGCT CGCGACCAGG ATCGCGCCGG TCGGCGGCAC GATCTCGGTC
GAGGTCGACC ACCGGCTCGG CGCCACCGCG ACCCTGGTGC TGCCGCTGCG GCGCGCGCTG
GCGGCGCCGG AGGAGGTGCC GGACTTCGGG CTGAGCGCAC GCGAGCTGGA CGTGCTCAGC
CGGGTGGCGC GCGGCCTGCG CAACCGGGAG ATCGCCCGCG AGATCCAGCT CAGCCCCGCG
ACGATCAAGT TCCACCTGGT GCGGATCTTC GAGAAGCTCG GGGTCGGCAC CAGGGGCGAG
GCCGCCGCGG TCGCGGTCGA GTTCGGCCTG GTCGGCAAGG CGGCGCGGGG TCAGGCCAGC
GCGATGGCCT CGATCTCCAC CAACCAGTCC GGCTCGTAG
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| Protein sequence | MEPVELFFRA VDLLDAPEGR HLEACSTAIA GLVPHRALVE LSASLPPIRV VGDPETKAAF
TPVVLADLLE SASAEPLWRG GTTAGGRPYR VSVLRAEPKR GTASVLVLVH DPEVVLDENE
ELAALQVVSA LWRLLATHRA ATRRAGRAAP MPMPTEIPNA LGTPNASGTP NTLGTRNALG
TPNALGTRDV LGTPNAPGAS DDEPYSAKLA AAAGAQVAAE LVQRQSALVK AMLVALRSSR
YDDRQARSEA TGLAMGALLD LRAEEQVRRG LSGEPVGEAF AALVKDLEPV VRRAGVRLEV
DEPGDGGDVP LELAGLAAAV STEVVLLALD RDAVTSLRVG WQVGEELVLR VRDNATSGFD
PAGVRALATR IAPVGGTISV EVDHRLGATA TLVLPLRRAL AAPEEVPDFG LSARELDVLS
RVARGLRNRE IAREIQLSPA TIKFHLVRIF EKLGVGTRGE AAAVAVEFGL VGKAARGQAS
AMASISTNQS GS
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