| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1466 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1585712 |
|---|
| End bp | 1586359 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | ACX39136 |
|---|
| Protein GI | 260448714 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.25338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG CAACACCTTT TCAGGTGATG ATTGTGGATG ATCATCCACT TATGCGACGC
GGTGTTCGTC AGTTACTGGA GCTTGATCCT GGCTCTGAAG TGGTCGCCGA AGCGGGCGAC
GGCGCGAGCG CTATCGATCT GGCGAATAGA CTGGATATCG ACGTGATCTT GCTGGATCTC
AATATGAAAG GTATGAGTGG CCTGGATACT CTCAATGCCT TGCGCAGGGA TGGCGTTACC
GCGCAAATTA TTATCCTGAC CGTATCCGAT GCCTCCAGCG ATGTCTTTGC GCTGATAGAC
GCAGGCGCAG ACGGTTATCT GTTGAAAGAC AGCGACCCGG AAGTATTGCT GGAAGCGATT
CGTGCCGGAG CGAAAGGCAG CAAAGTCTTT AGCGAACGCG TCAATCAGTA CTTACGTGAA
CGTGAAATGT TTGGCGCGGA AGAAGATCCC TTCAGCGTGC TGACGGAGCG CGAGCTGGAT
GTTCTGCACG AGCTGGCACA GGGGCTGTCA AATAAACAGA TTGCCTCGGT GTTGAATATT
TCCGAGCAGA CAGTAAAAGT ACATATTCGC AATCTGCTGC GTAAACTCAA TGTCCGCTCA
CGCGTGGCGG CCACCATTCT GTTCCTGCAA CAACGCGGGG CACAATAA
|
|---|
| Protein sequence | MPEATPFQVM IVDDHPLMRR GVRQLLELDP GSEVVAEAGD GASAIDLANR LDIDVILLDL
NMKGMSGLDT LNALRRDGVT AQIIILTVSD ASSDVFALID AGADGYLLKD SDPEVLLEAI
RAGAKGSKVF SERVNQYLRE REMFGAEEDP FSVLTERELD VLHELAQGLS NKQIASVLNI
SEQTVKVHIR NLLRKLNVRS RVAATILFLQ QRGAQ
|
|---|
| |