More than 300 homologs were found in PanDaTox collection
for query gene Snas_0942 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0942  cell envelope-related transcriptional attenuator  100 
 
 
349 aa  716    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.165177  normal  0.737127 
 
 
-
 
NC_013947  Snas_6385  cell envelope-related transcriptional attenuator  52.45 
 
 
358 aa  355  5e-97  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6317  cell envelope-related transcriptional attenuator  49.71 
 
 
390 aa  329  5.0000000000000004e-89  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  44.64 
 
 
352 aa  290  3e-77  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1681  cell envelope-related transcriptional attenuator  42.7 
 
 
357 aa  260  3e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0240426  normal  0.562376 
 
 
-
 
NC_009380  Strop_3629  transcription attenuator LytR  34.78 
 
 
378 aa  192  7e-48  Salinispora tropica CNB-440  Bacteria  normal  0.142384  normal 
 
 
-
 
NC_009953  Sare_4011  cell envelope-related transcriptional attenuator  32.79 
 
 
380 aa  184  1.0000000000000001e-45  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000201414 
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  29.91 
 
 
312 aa  160  3e-38  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  32.13 
 
 
358 aa  155  8e-37  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  32.59 
 
 
420 aa  150  4e-35  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  30.65 
 
 
414 aa  139  7e-32  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  29.15 
 
 
349 aa  116  5e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  33.22 
 
 
320 aa  106  8e-22  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  27.18 
 
 
382 aa  102  7e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  25.93 
 
 
480 aa  101  2e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  27.22 
 
 
497 aa  100  3e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  29.36 
 
 
336 aa  99.8  6e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  30.74 
 
 
307 aa  98.2  2e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  27.07 
 
 
390 aa  97.8  2e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  30 
 
 
409 aa  97.8  2e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  31.45 
 
 
307 aa  97.4  3e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  31.77 
 
 
311 aa  97.8  3e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  28.21 
 
 
468 aa  97.4  3e-19  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  31.77 
 
 
311 aa  97.8  3e-19  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  31.1 
 
 
311 aa  96.7  6e-19  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  27.85 
 
 
468 aa  95.9  9e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  30.43 
 
 
404 aa  95.1  1e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  29.92 
 
 
481 aa  94.7  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  24.33 
 
 
478 aa  94  3e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  26.2 
 
 
379 aa  93.2  6e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  26.95 
 
 
618 aa  92.8  7e-18  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  26.97 
 
 
442 aa  92.4  1e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  26.8 
 
 
509 aa  91.3  2e-17  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  30.08 
 
 
560 aa  91.3  2e-17  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  28.12 
 
 
306 aa  91.3  2e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  30.59 
 
 
407 aa  90.5  4e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  26.38 
 
 
362 aa  90.1  5e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  29.94 
 
 
326 aa  89.7  6e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  26.54 
 
 
530 aa  89.4  9e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  28.93 
 
 
393 aa  89  1e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  27.21 
 
 
379 aa  87.4  3e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  26.07 
 
 
410 aa  87.4  3e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  26.35 
 
 
643 aa  87.4  3e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  26.13 
 
 
521 aa  87  4e-16  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  27.52 
 
 
585 aa  87  5e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  28.4 
 
 
520 aa  86.7  5e-16  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  26.44 
 
 
394 aa  85.5  0.000000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  26.86 
 
 
619 aa  85.9  0.000000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  30.08 
 
 
296 aa  84.7  0.000000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  26.26 
 
 
453 aa  85.1  0.000000000000002  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  25.08 
 
 
505 aa  84.7  0.000000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  27.47 
 
 
567 aa  85.1  0.000000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  28.93 
 
 
374 aa  84  0.000000000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  26.75 
 
 
356 aa  83.6  0.000000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  28.34 
 
 
499 aa  83.2  0.000000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  27.05 
 
 
414 aa  83.2  0.000000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  25.22 
 
 
732 aa  82  0.00000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  24.6 
 
 
391 aa  82  0.00000000000001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  27.99 
 
 
491 aa  82  0.00000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  24 
 
 
381 aa  81.3  0.00000000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  27.81 
 
 
365 aa  81.3  0.00000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  28.47 
 
 
486 aa  80.9  0.00000000000003  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  23.02 
 
 
389 aa  80.9  0.00000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  26.4 
 
 
400 aa  80.5  0.00000000000004  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  26.77 
 
 
395 aa  80.1  0.00000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  24.54 
 
 
373 aa  80.1  0.00000000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  24.68 
 
 
734 aa  80.1  0.00000000000006  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  24.44 
 
 
549 aa  80.1  0.00000000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  25.19 
 
 
335 aa  79.7  0.00000000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  28.75 
 
 
466 aa  79.3  0.00000000000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  24.66 
 
 
495 aa  79.3  0.00000000000009  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  25.34 
 
 
517 aa  79.3  0.00000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  26.14 
 
 
353 aa  79.3  0.00000000000009  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  27.4 
 
 
419 aa  79.3  0.00000000000009  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  28.03 
 
 
1336 aa  79  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  26.06 
 
 
512 aa  78.6  0.0000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  28.72 
 
 
434 aa  79  0.0000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  24.91 
 
 
625 aa  78.6  0.0000000000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  24.12 
 
 
487 aa  79  0.0000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  24.75 
 
 
504 aa  79  0.0000000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  26.03 
 
 
545 aa  78.2  0.0000000000002  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  25.88 
 
 
526 aa  77.8  0.0000000000003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  26.28 
 
 
407 aa  77.4  0.0000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  24.45 
 
 
406 aa  77.4  0.0000000000004  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  24.5 
 
 
465 aa  76.3  0.0000000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  28.53 
 
 
463 aa  75.9  0.000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  27.69 
 
 
445 aa  75.5  0.000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  27.52 
 
 
490 aa  75.1  0.000000000002  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  27.02 
 
 
434 aa  75.1  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  27.59 
 
 
304 aa  74.7  0.000000000002  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  24.01 
 
 
377 aa  74.7  0.000000000002  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  21.97 
 
 
563 aa  74.7  0.000000000002  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  27.59 
 
 
304 aa  74.3  0.000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  24.28 
 
 
540 aa  74.3  0.000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_008528  OEOE_1732  transcriptional regulator  28.72 
 
 
296 aa  74.3  0.000000000003  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  28.83 
 
 
377 aa  73.9  0.000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  24.32 
 
 
521 aa  73.9  0.000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  26.67 
 
 
573 aa  73.9  0.000000000004  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  27.75 
 
 
488 aa  73.9  0.000000000004  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_011898  Ccel_0666  cell envelope-related transcriptional attenuator  23.08 
 
 
377 aa  73.2  0.000000000006  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
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