| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5021 |
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| Symbol | |
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| ID | 5705158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5691405 |
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| End bp | 5692343 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641274414 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001539755 |
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| Protein GI | 159040502 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00237783 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTGCTGG CCGGCGTCGC CGTGGTCGGC CTCCGCGAGC TCACCGGGCG GTACGAACAG
GCAGTGGCCC AGGAGCAACT GCTCGACCCC AGCGCGCGAC AGGACCAGAC AGACCTGGAC
GGGCCATTGA ACTACCTGCT CATCGGCACT GACCGCTGGC GGAGCAGCGG GACCACCGAC
CGACGCTCGG ACGCCATCCT CGTCGTACAC GTGCCGACCG GCGGACGCGA GGCGTTCCTG
ATGTCCGTAC CCCGGGACCT GCTCGTCAGC ATTCCCGCCG CCCCCGGGTA CGGCGGTGGC
CAGGACAAGA TCAACTCCGC ATTCACACAC GGTGGTGGGG GGCAGCCGGG TGCCCGGCTA
CTCTCCGCCA CCCTGGCCCA CCTGGCCGGA ATCCGCTTCG ACGGTGCCGC CGTCATCGAC
TTCTCCGGCT TCCGCGAGGT CATCGACCTC CTCGGCGGCG TCCGAATATG CGTCGACACC
GAGTTCCGTT CGATCCACAC CGACCGGGTC TTCGCCCCCG GATGCCAGGA GATGGACGGT
CCCACCGCGC TGGACTTCGT TCGCCAGCGT CACAACCTGC CCAACGGCGA CTACGACCGA
CAGACCCACC AGCAGCAACT GCTCCGAGCA GTACTGCAAC GCACCTCCGA GACCTCGCTG
CGGAGCGACC CGATCCGCCT GGACCGGGTG ATCCGTGCGG TCGGCAGCTC ACTGACCGTG
GACACCAACG GAGTACCCCT GGCGGACCTG GTGATGGCGT TCCGGGACCT GCCGACGGAC
GCCCTACGCG GAATCCAGAT GCCGTCGCAC TCGCAAACCA TCGGCCAGGT CTCGTACGTC
GTACTCGACG ACGGCGGTTC CGATCTCCTC ACGGCGGTTC GGGACCGAAG AGTGCCGCAA
TGGGCCCGGG CCAACCCCCG GTGGGTCACC CAGCTCTAA
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| Protein sequence | MLLAGVAVVG LRELTGRYEQ AVAQEQLLDP SARQDQTDLD GPLNYLLIGT DRWRSSGTTD
RRSDAILVVH VPTGGREAFL MSVPRDLLVS IPAAPGYGGG QDKINSAFTH GGGGQPGARL
LSATLAHLAG IRFDGAAVID FSGFREVIDL LGGVRICVDT EFRSIHTDRV FAPGCQEMDG
PTALDFVRQR HNLPNGDYDR QTHQQQLLRA VLQRTSETSL RSDPIRLDRV IRAVGSSLTV
DTNGVPLADL VMAFRDLPTD ALRGIQMPSH SQTIGQVSYV VLDDGGSDLL TAVRDRRVPQ
WARANPRWVT QL
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