More than 300 homologs were found in PanDaTox collection
for query gene Franean1_5205 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  100 
 
 
560 aa  1107    Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  46.31 
 
 
512 aa  285  2.0000000000000002e-75  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  44.08 
 
 
486 aa  272  1e-71  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  40.35 
 
 
545 aa  249  6e-65  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  39.38 
 
 
625 aa  235  2.0000000000000002e-60  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  42.72 
 
 
516 aa  234  4.0000000000000004e-60  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  43.59 
 
 
520 aa  231  2e-59  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  39.76 
 
 
573 aa  218  2e-55  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  42.73 
 
 
491 aa  209  1e-52  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  36.42 
 
 
390 aa  187  5e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  32.41 
 
 
619 aa  173  7.999999999999999e-42  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  33.42 
 
 
734 aa  171  4e-41  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  36.59 
 
 
468 aa  167  5.9999999999999996e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  32.51 
 
 
1336 aa  166  1.0000000000000001e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  33.42 
 
 
410 aa  164  3e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  33.44 
 
 
393 aa  164  3e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  38.26 
 
 
526 aa  164  4.0000000000000004e-39  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  34.22 
 
 
307 aa  159  1e-37  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  34.62 
 
 
478 aa  157  3e-37  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.95 
 
 
505 aa  157  3e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  39.3 
 
 
506 aa  157  6e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  32.37 
 
 
549 aa  156  7e-37  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  32.39 
 
 
497 aa  156  1e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  35.51 
 
 
504 aa  154  2.9999999999999998e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  40.08 
 
 
320 aa  153  7e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  32.26 
 
 
481 aa  153  8e-36  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  30.68 
 
 
509 aa  152  2e-35  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  33.44 
 
 
480 aa  152  2e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  34.56 
 
 
409 aa  150  7e-35  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  32.31 
 
 
453 aa  149  1.0000000000000001e-34  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  31.43 
 
 
521 aa  149  2.0000000000000003e-34  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  37.26 
 
 
414 aa  146  1e-33  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  34.98 
 
 
481 aa  145  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  35.47 
 
 
466 aa  145  2e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  31.82 
 
 
508 aa  143  6e-33  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  29.87 
 
 
732 aa  143  7e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  33.54 
 
 
349 aa  142  9.999999999999999e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  30.77 
 
 
540 aa  142  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  34.31 
 
 
499 aa  142  1.9999999999999998e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  30.58 
 
 
400 aa  142  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  34.25 
 
 
424 aa  140  4.999999999999999e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  29.09 
 
 
522 aa  140  4.999999999999999e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  29.5 
 
 
487 aa  140  6e-32  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  33.97 
 
 
520 aa  140  7.999999999999999e-32  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  34.09 
 
 
420 aa  139  2e-31  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  34.34 
 
 
551 aa  138  3.0000000000000003e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  28.88 
 
 
584 aa  138  3.0000000000000003e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  32.11 
 
 
379 aa  137  4e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  30.27 
 
 
521 aa  137  5e-31  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  35.17 
 
 
307 aa  137  5e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  32.18 
 
 
313 aa  136  9.999999999999999e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  31.25 
 
 
496 aa  136  9.999999999999999e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  34.72 
 
 
417 aa  135  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  36.26 
 
 
395 aa  135  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  33.21 
 
 
468 aa  135  3e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  36.15 
 
 
311 aa  134  5e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  30.79 
 
 
406 aa  134  5e-30  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  36.15 
 
 
311 aa  134  5e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  36.15 
 
 
311 aa  134  5e-30  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  32.42 
 
 
517 aa  134  6e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  37.83 
 
 
336 aa  134  6e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  29.21 
 
 
434 aa  133  1.0000000000000001e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  32.19 
 
 
362 aa  132  2.0000000000000002e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  30.88 
 
 
434 aa  131  3e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  29.88 
 
 
676 aa  129  1.0000000000000001e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  29.5 
 
 
567 aa  129  1.0000000000000001e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  29.36 
 
 
530 aa  129  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  31.72 
 
 
395 aa  129  1.0000000000000001e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  29.66 
 
 
643 aa  126  9e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  32.2 
 
 
306 aa  126  9e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  28.91 
 
 
432 aa  126  1e-27  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  30.91 
 
 
618 aa  125  2e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  30.93 
 
 
538 aa  124  3e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  27.4 
 
 
489 aa  123  7e-27  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  35.06 
 
 
326 aa  123  7e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  31.71 
 
 
303 aa  122  9.999999999999999e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  30.72 
 
 
404 aa  122  9.999999999999999e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  32.87 
 
 
684 aa  122  9.999999999999999e-27  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  33.33 
 
 
407 aa  123  9.999999999999999e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  31.8 
 
 
363 aa  121  3e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  31.86 
 
 
442 aa  121  3e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  30.58 
 
 
296 aa  121  3.9999999999999996e-26  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  28.07 
 
 
394 aa  120  4.9999999999999996e-26  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  34.68 
 
 
382 aa  120  6e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  29.39 
 
 
493 aa  120  9e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  30.77 
 
 
465 aa  119  1.9999999999999998e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  30.34 
 
 
699 aa  117  5e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  30.34 
 
 
699 aa  117  5e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  30.82 
 
 
649 aa  117  6e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  30.28 
 
 
701 aa  116  7.999999999999999e-25  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  30.63 
 
 
493 aa  116  1.0000000000000001e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  28.52 
 
 
463 aa  115  2.0000000000000002e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  32.97 
 
 
373 aa  114  5e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  32.93 
 
 
381 aa  113  7.000000000000001e-24  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  30.77 
 
 
352 aa  113  8.000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  29.73 
 
 
687 aa  112  1.0000000000000001e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  29.18 
 
 
365 aa  111  4.0000000000000004e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  28.57 
 
 
319 aa  111  4.0000000000000004e-23  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  29.72 
 
 
490 aa  111  4.0000000000000004e-23  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  29.72 
 
 
490 aa  111  4.0000000000000004e-23  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
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