| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0369 |
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| Symbol | |
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| ID | 5537831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 459943 |
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| End bp | 461013 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640892532 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001430519 |
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| Protein GI | 156740390 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.117824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.3088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATACGTC ACCACGGTGT GCGTCGTCGT TTTGTTCTCA CGCTATTGGG CATGATGGCG
CTGACCGGAA TTATCGCCAT CGCCCGCCTC GGCTTCGAAT GGAAACAGGC GCTCGACGAT
GTGGACGCAA TGATCGTGAC GCCCGTCGTC CTTGCGCCGA CCCCTGAACC GATGCTCAGC
ACGTCGGTTC CTGCCGATGC GCCGGTGAAT CCTCTACCGC TATTGCCAAC CGTCGCTCCA
ACAATGGCGC CTGAGAATGA TGATCCGGTC AATATTCTGC TCCTCGGCGC CGATGCGCGC
GTTGGCGAAG AGATCAGCCG TACCGATGCC ATCATTCTGC TCCATATCAA TCCGCGCACC
GGTCGCGTCA GTATGCTGTC GTTCCCGCGC GATCTGATGG TCGATACGCC GGGATTTGGG
CGACGGAAAA TTAATTCGGT CTATCTGCTT GGCGAGACCC GTCTTGGCAA AGGGTATGGC
GCTGCTTTGT TAAAGCAAAC CGTCTCTGAT CTGGTCGGCG TTCCGGTCCA TCACTTTGCG
CTGATCAACT TCGAGGGGTT TCGCCGTGTT ATCGACTTGG TCGGCGGTAT TTCCATCGAT
GTGCCCAAAG TGATCGATGA TCCGCGCTAT CCGGTGGATG CGTTCCCCGG CGATGTGCGC
ACGATGCAGG TGCGCTTCGA ACCGGGGACA CAGTGGATGG ATGGTGAACG CGCCCTGATC
TATGCGCGCA CACGCCATGC CGATAGCGAC TTCGGGCGGA ATCAACGTCA GCAACAGGTG
CTGCTGGCGC TGGTCGAACG TGTGCGTGAA CGTGGGCTGA TTTCGCAGAT CAACAAGATC
GACGACTATA CCAGCGCCCT GCGCGACTAT GTGCGCACCG ACGTGCCACG CAGCGAGATG
ATCCGCCTGG CGCGCGCTGC AAGCCGCATG GACCTCGATA ATATTCAGCG GTATGCGATC
GACTCGAAGA TGATTATCAC GCTGGGCAGC CCCGATACGT TTGCGGCTGA TCCTAAAGCC
TTGCGCGAAG TCGTTGACCG CATGATCGCC GGAGGCGCCC CCACGCCATA G
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| Protein sequence | MIRHHGVRRR FVLTLLGMMA LTGIIAIARL GFEWKQALDD VDAMIVTPVV LAPTPEPMLS
TSVPADAPVN PLPLLPTVAP TMAPENDDPV NILLLGADAR VGEEISRTDA IILLHINPRT
GRVSMLSFPR DLMVDTPGFG RRKINSVYLL GETRLGKGYG AALLKQTVSD LVGVPVHHFA
LINFEGFRRV IDLVGGISID VPKVIDDPRY PVDAFPGDVR TMQVRFEPGT QWMDGERALI
YARTRHADSD FGRNQRQQQV LLALVERVRE RGLISQINKI DDYTSALRDY VRTDVPRSEM
IRLARAASRM DLDNIQRYAI DSKMIITLGS PDTFAADPKA LREVVDRMIA GGAPTP
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