| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_4947 |
|---|
| Symbol | lytR |
|---|
| ID | 2857790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | - |
|---|
| Start bp | 5000690 |
|---|
| End bp | 5001604 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637516382 |
|---|
| Product | membrane-bound transcriptional regulator LytR |
|---|
| Protein accession | YP_039256 |
|---|
| Protein GI | 49481246 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.0889022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAAAA AGATTTTTTT ATGGGTTTTA AGCATTCTAG GTTTGCTACT ACTCATAGGA
GGAATATATG TTTATCGTGT TTATTCTAAT GTATCAAGTA CGTTAGATTC GGTGCATCAA
CCATTAAAAC GCGATAAGTC TGAAAAGCGT GATCAAAAAA TAAACCTTAC TGATCAAAAA
CCCATTTCAA TTTTATTAAT GGGAGTTGAC CAAAGAGGAG AAGAAACTGG TCGATCAGAT
TCGCTTATGC TATTTACTTT AAATCCAAAA ACTAAGTCTA TGAAAATTAC AAGTATCCCT
CGTGATTCTT ATACTGAAAT TATTGGGAAA GGTAAGAAAG ATAAAATTAA TCATGCTTAT
GCATTTGGTG GTATTGACAT GGCTGTGAAA ACAGTGGAGA ATTTTCTTGA TATCCCAGTT
GATCATTACA TTGAAGTAAA TATGGAAGGA TTCAAGGATA TTGTAGATGC TGTAGGTGGT
GTGGAGGTCA ATAATGATTT AGAATTTACA TCAGTAGGTA CACATTTTGA AAAAGGAAAT
TTACACTTAG ATGGTGAAAA AGCTTTAAAA TACTCTCGTA TGCGTTATGA AGATCCACGT
GGTGACTTCG GTCGCCAAAT GCGCCAACGT CAAGTCATCC AAGCTGTAAT TAAAAAGGGT
GCAAGTGTAT CTTCTCTAGC AAGCTACGGT GATGTATTAA AAGCAATTGA GAAAAATGTT
AAAACAAGTT TAACTCAAGA GCAAATGTTT GATATTCAAA AGAACTATAA AGATTGCATG
CAGAACAGTG AAGAAATCCA AATCCCAGGT GACGGCCACA AAGCCGCTGA TGGTATTTGG
TATTACTACG TTCCAGATGC AGCGAAACAA GATATTACGA ATAAGTTAAG AGCGCATCTT
GAAGTGACTA AGTAA
|
|---|
| Protein sequence | MRKKIFLWVL SILGLLLLIG GIYVYRVYSN VSSTLDSVHQ PLKRDKSEKR DQKINLTDQK
PISILLMGVD QRGEETGRSD SLMLFTLNPK TKSMKITSIP RDSYTEIIGK GKKDKINHAY
AFGGIDMAVK TVENFLDIPV DHYIEVNMEG FKDIVDAVGG VEVNNDLEFT SVGTHFEKGN
LHLDGEKALK YSRMRYEDPR GDFGRQMRQR QVIQAVIKKG ASVSSLASYG DVLKAIEKNV
KTSLTQEQMF DIQKNYKDCM QNSEEIQIPG DGHKAADGIW YYYVPDAAKQ DITNKLRAHL
EVTK
|
|---|
| |