Gene Sros_9260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9260 
Symbol 
ID8672608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10211373 
End bp10212818 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content70% 
IMG OID 
ProductTranscriptional regulator-like protein 
Protein accessionYP_003344621 
Protein GI271970425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.969868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGCCC TGGCCCATCC CCTCGGGAGT CACGTGAGCA GCGGGTTGAC CGACGCACCC 
TCCAAGCCCG TGGAGCAGCG TCCCGCCCGG CGCCGCCGCA GGTGGCTGTG GTGGCTGGTG
GCCGCGGTCA CCGTCGTCGT GGTCGCGGTG GCGGCGACGG TGGGCGGGGT CTACGTCAAG
CTGACCGGCA ACGTCAAGCA CGTCGACGTC ACGCCGGAGG ATCTGGGCCC CCGTCCGGCC
AAGGTCGCCA CCAAGGCGCT GAACGTCCTG GTCGTCGGAT CGGACCAGCG CAGCGGCAAG
AACGCCAAGT ACGGCAGGTT CCCCGGCGAG CGGACCGACA CGATCATGCT GGCGCACATC
TCGCCGAAGC GGGACAACGC GATGGTCGTC AGCTTCCCCC GGGACTCGAT GGTCCAGCTC
CCCGAGTGCC GGGCCAGGCA GGGGCTCCCC GGCCAGCGGC CGCACCTGGG CATGATCAAC
GAGTCGTTCA ACTCCGGCGG GATCACCTGC ACCTGGAAGA CCGTCGAGTC GCTCACCGGC
ATCCACATCG ACCACTTCGT GAAGGTCGAC TTCACCGGGT TCAAGGGCAT GGTCGACGCG
GTCGGCGGCG TCGAGGTCTG CCTGCCCGAA CCGGTCCACG ACAAGAAGGC CCTGCTGACC
CTCCCCGCGG GCCGGCAGAC GCTCAAGGGC GAGCAGGCCC TGGGCTACGT CCGGGCCCGC
TACAGCCTGG GCGACGGCTC CGACATCGGG CGCATCCAGC GGCAGCAGAT GTTCATCGCG
TCCATGGTCA AGAAGGTGAT GAGCGGCGAG ACGCTCACCG ACCCCGGGAA GCTGTTCGGC
TTCCTCGACG CGGCCACCAA GTCGGTCACG ACCGACCCCG GGCTCACCCC CCTCGTCATG
AAGGACCTGG CGACCAGCGC CCAGGGCCTG GCCGCCGGGC AGATCCACTT CATCACCACC
CCCTGGCGCT ACTCGGTCAC CTATCCCGGC CGGGTGGAGT GGGTCGGGCC GCAGAGCAGG
AAGCTGTTCC AGATCGTCGC CCAGGACAGG GCGGTCACCG GTTCCGGGGT CAAGGGCGGC
CAGTCCAGGG TGCCCCGGTC GAAGATCCAG GTCGAGGTGC GCAACGGGAC CACCCGTTCG
GGCCTGGCCT CCCTGGTGGC CGTCAGGCTT GAGGAACGGG GCTACCACAT CGCCAAGATC
GGCGACGCGC CGCGCAAGCC GTACCCGAAG ACCACCATCG CCTACTCGCC CAACGGCGCG
GCCGGGGCGC CGACCCTCAC CCGTGACCTG CTCGCCTCCA GCGGCAGGCC CGTCCCCCGG
GCGACCACGG CGCGGCTCGT CCTGACCATC GGCGACGACT GGAAGGGCCT CAAGCCGCCC
CGTCAGGACG ACGCCGCCGA CCTCAACGGC TTCGACGCCA CCCACGACTC CTGCGCAGGC
GCCTGA
 
Protein sequence
MHALAHPLGS HVSSGLTDAP SKPVEQRPAR RRRRWLWWLV AAVTVVVVAV AATVGGVYVK 
LTGNVKHVDV TPEDLGPRPA KVATKALNVL VVGSDQRSGK NAKYGRFPGE RTDTIMLAHI
SPKRDNAMVV SFPRDSMVQL PECRARQGLP GQRPHLGMIN ESFNSGGITC TWKTVESLTG
IHIDHFVKVD FTGFKGMVDA VGGVEVCLPE PVHDKKALLT LPAGRQTLKG EQALGYVRAR
YSLGDGSDIG RIQRQQMFIA SMVKKVMSGE TLTDPGKLFG FLDAATKSVT TDPGLTPLVM
KDLATSAQGL AAGQIHFITT PWRYSVTYPG RVEWVGPQSR KLFQIVAQDR AVTGSGVKGG
QSRVPRSKIQ VEVRNGTTRS GLASLVAVRL EERGYHIAKI GDAPRKPYPK TTIAYSPNGA
AGAPTLTRDL LASSGRPVPR ATTARLVLTI GDDWKGLKPP RQDDAADLNG FDATHDSCAG
A