| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1248 |
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| Symbol | |
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| ID | 5669661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1503306 |
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| End bp | 1504844 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641240180 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001505608 |
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| Protein GI | 158313100 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.375848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0192244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGGAC GTCCGGCGCA GGGCCGCCCG GCGCGGGACC GACCGGCCGC CGGCGAGGAG
AACTGGCCGG CGGGAGCCTG GCCGCGCCAC GAGCCCCGCT CGGCTCCCGC GCCGATCCCG
CCCACCCGCC GGCTGCCTCC GCCGGGCGCC ACCGACGGCG GGCGGACCTG GCCCGCCCCG
AACGACGGGC CCGGCGGGTA CCGCGCGCCG GCCGGCCCGG TGCCCGGGTA CGGCGGCCCG
CGCGGGCCGT ACGACACCCC GGGCGAGGAC CTGCCCGCGG AGGAGCCACA CCGCCCGGTG
AGCGGTGTGC GCCGGACGGT GACCCTGGTG GCCGCCATCG TCTCGGTGGC CGTCCTGGTC
GTCGCCACGA GCGGCTGGGC CGTGCTGCGC CACTACGACG GCAAGGTGAA CCACATCGAG
CTCACGTTCT CCGACTCGGC CGCGCGGCCC TCCGCCGCCG GCGGAGGCAC CCAGAACATC
CTGCTGGTGG GCTCGGACAC CCGCGCGGGC ACCGGGGGCG AGTTCGGCCA GACCGAGGGG
CAGCGCTCGG ACACCACGAT CCTCGCCCAC CTCGACGCCG ACGGCTCGAC GACCCTGGTG
TCCTTCCCCC GCGACCTGTG GGTGCAGATC CCGGGCTACA CCGGCTCCGA CGGCACCCAG
CACGACGCGC AGAAGTCCAA GCTCAACGCG GCGTTCGCCT ACGGCGGGCC GTCCCTGCTG
GTCCGGACCA TCGAGACGCT CACCAACATC CGGATCGACC ACTACCTCGA GATCGACTTC
CTGGGCTTCC AGGCGATGAC GGACGCGCTC GGCGGCGTCA CCGTCTGCGT GAAGGAGCTG
ACGCCCGAGC TCAAGGCGCA GGGCTTCGAC AACCTCAACG ACCGGTACTC CGGCTGGCAC
GGCCAGGTCG GCAACAACAC GCTCACCGGT GAGCAGGCGC TGGCCTTCGT CCGGCAGCGT
TACGGCCTGC CCGGCAGCGA CCTCGACCGC ATCCACCGCC AGCAGCAGTT CCTCGGCGCG
GTGTTCCGCG AGGTCGCCTC CACCGGGACC CTGCTCAACC CGCGCAAGCT GCTCGACGTC
GTGGACGCGG CCACCTCCGC GCTGACCCTG GACGACCACA CCTCGCTCAC TGATCTGCGC
CTGCTCGCCG TCCGGATGCA GGGCATCAGC ACCGGTGGGG TCACCTTCGC GACCGTCCCG
GCCACGCCGT CACAGGCCGG CGGGCAGTCC GTGCTCCTGG CGAAGACCGA CGAGCTGACG
ACGCTGCTCG CCGGGATCGG CGGCTCCCCG CCGCAGGCCG CCGGGCCCCC CGCGCTCGGC
CCCGCCGGCT CGCCGTCCGG CTTGACGGCG GCCTCGGCGG CCTCGGCGGC CTCCGTGGGT
GCTACGGCCG CGTCCGGTGC CGTGCCGGCG TCCGGTACCG GCCACGGTTC GGTGGTCACC
GCGGACCTGC GCGCCACCGG AGGGCGGCCC GCGGGCGGCG CGGTGACCCT GGCCCAGGCC
ACCCCCGAGC CGTCCGGCGG GGTGGGCTGC ACCTACTGA
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| Protein sequence | MQGRPAQGRP ARDRPAAGEE NWPAGAWPRH EPRSAPAPIP PTRRLPPPGA TDGGRTWPAP
NDGPGGYRAP AGPVPGYGGP RGPYDTPGED LPAEEPHRPV SGVRRTVTLV AAIVSVAVLV
VATSGWAVLR HYDGKVNHIE LTFSDSAARP SAAGGGTQNI LLVGSDTRAG TGGEFGQTEG
QRSDTTILAH LDADGSTTLV SFPRDLWVQI PGYTGSDGTQ HDAQKSKLNA AFAYGGPSLL
VRTIETLTNI RIDHYLEIDF LGFQAMTDAL GGVTVCVKEL TPELKAQGFD NLNDRYSGWH
GQVGNNTLTG EQALAFVRQR YGLPGSDLDR IHRQQQFLGA VFREVASTGT LLNPRKLLDV
VDAATSALTL DDHTSLTDLR LLAVRMQGIS TGGVTFATVP ATPSQAGGQS VLLAKTDELT
TLLAGIGGSP PQAAGPPALG PAGSPSGLTA ASAASAASVG ATAASGAVPA SGTGHGSVVT
ADLRATGGRP AGGAVTLAQA TPEPSGGVGC TY
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