| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1037 |
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| Symbol | |
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| ID | 8325209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1146600 |
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| End bp | 1148798 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941581 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_003098839 |
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| Protein GI | 256375179 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACAACC GGCCGCCGAG GCAGGGCGAC CCGGACGGGT TCGGCAGGCG CCCCGTCCCG
CCACGGGACC CCTCCGCGCG CAGAGCACCC GCCGGCGGGG ACCGGCTCCC GCCCAGGCGC
GGCCCGGTGG AGGGCGAGCG CGGCGGCAGG CAGACGCCCC CGGAGGGCGG CAGGCCGCTG
CCCGAGGGCG CCAGGAGCCG TCCGCCCGAG GGCGCGCGGA GCCGACCGCC GATCCGGAAC
GTGGCGCCGC CCACGGAGCG CACCGCGCCG GTGCGCGCCG ACCGCGGGCG CGACGAGCCG
CCGCGCGCCG GGAGGCTGGA CGACCAGCGC GGTCGCCCGC CGAGGTCCGA GCGCCGCGAG
GCGAACGGGC ACGCGCCCAC GGAGCGGACC ACGCCCGCGC GGGCGATGCG CAGCGAGCGG
GCGCGCAACG AGGGCCTGAC CGACGGGCCC GCGCTGAACC GCGCGCGCGA CGAGGCGATG
GAGCGCAGGC GCGCGGCCCG CGCCGCGCGC GCGGCGGAGG CCGAGGAGCT GTCGCGGCCC
AGGAGCGGCG CGCGCCCCGG CGAGGAGGAC CGACCGGTCC GGCCGGAGCG GCGCGGCCGG
GTGGTCAAGG GCGTCGTCGT GGACGCCGGG GAGGACGCGG CCGAGGACGG CCCGCCGAGG
TCCCCCAGGC CGAGGACCGT CCCGCCGAGG CCCGCGCCGA GGCAGCGGCC GACGCAGAGC
TCGCCGCCCC CGTCCAGGGT GAGGCTGGCC GGGCGCACGG CGCTGGCGCT GGTGTCGACG
GCGGTGCTGC TCGCCACCGG GTACGGCTAC AAGAACCTGA ACGCCCTGAC GGACAACATC
GCCACCACGG ACGTGATCAG CGCGGACGCC GGCGGCGAGA AGCCGCAGGA CGGGTCGATC
GACATCCTGA TGGTCGGCAT GGACAGCCGC ACCGACTCCA AGGGCAACCC GCTGCCGCAG
GAGATCCTGA ACGAGCTGCA GGCGGGCGGC TCGGAGGACG GCGGGCTGAA CACCGACACG
CTGATCCTGC TGCACATCCC GAACGACAGC GGCAAGGCGG TCGCGGTGTC GTTCCCGCGC
GACTCCTACG TGGACATCCC CGGCGGCTAC GGCAAGCACA AGATCAACTC GGCGTACGGC
TACGGCAAGA ACGCCGCGCT GGAGGAGCTC GAGGGCGCGG GCGAGTCCGG CACCGCGCTG
GAGCTCAAGG CGAGGCAGGC GGGCAGCAAG AGCCTGATCA GCACGATCGA GAACCTGTCC
GGCGTCAAGA TCGACCACTA CGCCGAGGTC AACCTGGTCG GCTTCTACGA GATCACCAAG
GCCGTCGGCG GCGTGGACGT GTGCCTCAAC AACGCCGTCC AGGACGACCT GTCGGGGGCC
GACTTCAAGA AGGGCCCCCA GACCATCCAG GGCCGCGAGG CGCTCTCGTT CGTGCGGCAG
CGCTACGGCC TGCTGCGCGG CGACCTGGAC CGGGTCGTGC GCCAGCAGGT GTTCATGGCG
GGCCTGGCGA ACAAGGTGCT CTCCGCGGGC ACGCTGACCG ACCCCGGCAA GCTGGGCGAC
CTGATCGACG CGCTGTCCAA GTCCATCACC CTGGACGAGG GCTGGGACGT GCTGAGGTTC
GCGACCCAGA TGAAGGGCCT GACCGGCGGC AGCATGGAGT TCAAGACCAT CCCGACCGGC
AACCCCGAGC TGATGACCGA CAGCGACGGC ATGGCGGTCG AGATCATCCC CTCCCAGGTG
AAGAAGTTCT TCAAGGACTT CGCCAAGTCC GAGGAGGAGA AGGACAAGGC CACCGTGGAC
CCGGCGACGG TGACCGTCGA GGTCCGCAAC GCCTCCGGCA TCCCCGGCCT GGCGTCCAGG
GTGCTCCAGG AGCTGGTGGC GCTGAAGTTC GTCGCGGGCG ACGCGGACAA CGCCGACGCC
GACCAGGTCG CCTCCGCGGT GCTCTACGGC AAGGGCGGCG AGGCGGGGGC GCAGGCCGTC
GCCGACGCGC TCGGGGACGT GGAGATCAAG GAGGACGCCA CGGTCGCGGC GGGCACGGCG
CGCGTGGTGG TCGGGTCCAG CTACGACGGT CCCGGCGTGG CCAACCTGCT CGGACAGCGT
CTGCTCGCCT TGGACGGCGG CTTCCGCACC CAGCAGGGGC CCCAGGAGGA CCAGACCGGC
GCGGAGATCA ACGCGGGCGG CATCCGCTGC GTGAACTAG
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| Protein sequence | MDNRPPRQGD PDGFGRRPVP PRDPSARRAP AGGDRLPPRR GPVEGERGGR QTPPEGGRPL
PEGARSRPPE GARSRPPIRN VAPPTERTAP VRADRGRDEP PRAGRLDDQR GRPPRSERRE
ANGHAPTERT TPARAMRSER ARNEGLTDGP ALNRARDEAM ERRRAARAAR AAEAEELSRP
RSGARPGEED RPVRPERRGR VVKGVVVDAG EDAAEDGPPR SPRPRTVPPR PAPRQRPTQS
SPPPSRVRLA GRTALALVST AVLLATGYGY KNLNALTDNI ATTDVISADA GGEKPQDGSI
DILMVGMDSR TDSKGNPLPQ EILNELQAGG SEDGGLNTDT LILLHIPNDS GKAVAVSFPR
DSYVDIPGGY GKHKINSAYG YGKNAALEEL EGAGESGTAL ELKARQAGSK SLISTIENLS
GVKIDHYAEV NLVGFYEITK AVGGVDVCLN NAVQDDLSGA DFKKGPQTIQ GREALSFVRQ
RYGLLRGDLD RVVRQQVFMA GLANKVLSAG TLTDPGKLGD LIDALSKSIT LDEGWDVLRF
ATQMKGLTGG SMEFKTIPTG NPELMTDSDG MAVEIIPSQV KKFFKDFAKS EEEKDKATVD
PATVTVEVRN ASGIPGLASR VLQELVALKF VAGDADNADA DQVASAVLYG KGGEAGAQAV
ADALGDVEIK EDATVAAGTA RVVVGSSYDG PGVANLLGQR LLALDGGFRT QQGPQEDQTG
AEINAGGIRC VN
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