Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6349 |
Symbol | |
ID | 8330560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7444683 |
End bp | 7445915 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946778 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_003103997 |
Protein GI | 256380337 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGCCG TCGTCATAGC GGGCAGAACC GGGTTGGCGC TGCTCTCGGT GGTGGTGCTG GTGGTCACCG GCTACAGCTG GTCCACGCTG CGGCGGGTCC AGGAGAGCGT GAACACCACC GACGTGCTGA CGTCCCTGGC GGACGTGCCG AACGCCCCTC CCGCCGACGA CGGCGCGATC GACCTCCTCC TGGTGGGCAG CGACAGCCGC ACCGACGCGC AGGGCAACCC GCTGCCCGCG TCGGTGCTGC GCCAGCTGCG CACCGAGGCG ACCGACACCC TCAACACGGA CACGATCATC GTGCTGCGGG TGCCGCGCGA CGGGTCGCGG GCGCACGCGG TGTCCATCCC CCGCGACACG TACGTGCCGA TCCCCGGCGA TCGCGAGGAG AAGATCAACG GGGCCTACGG GGTCACGAAG TTCCTCACCA TGGAGCGGCT GCAGGCCGAG GGCGTTCCGC TGGCCGAGCG GGAGAAGCGC GGCGACCAGG CCGGGCGGGC GGCGCTCGTG CAGGTGGTGC AGGAGCTGAC CGGGGTCAGG GTCGACCACT ACGCCGAGGT GAACCTGTAC GGGTTCTACC GGCTGACCGA GGTGATCGGC GGGGTCGACG TGTGCCTCAA GGAGGCGACC AGCGACCCGG ACTCGGGGGC GGACTTCCGG GCGGGCGCGC AGACGCTGTC CGGCGGTGAC GCGCTGGCGT TCGTGCGGCA GCGCAAGAAC CTGCCGAGCG GGGACCTGAG CCGGATCACC CGGCAGCAGG TGTTCCTGTC GTCGGCGATG TCGAAGCTGC TCACGGCGGG CACGTTCGCC GACCCGTCGA AGCTGTCCGG GCTGCTGGAG GCGGTGAGCA AGTCGGTCGT GGTGGACGAC GGGCTGGACG TCGCCACGCT CGCGGGTCAG CTGGGCGGGC TCTCCGGCGG GAACGTGGAG TTCGCGACGA TCCCGGTGAC GGCGGTGGGC GCGGTCAACG ACCGGGGGCA GAGCGTGGTG CTGGTGGACC GGGAACAGGT GCGGGCGTTC GTGGCGCGGG TGCTGGGCGA GAAGACGCCC GAGCCGACGG CTCCGGCTTC CTCGACGGCT CCGGCGTCCT CGGAAGCGGC TCCGACCACC TCGGACGCGG CCCCGACCAC CACCGAGCGG CTGTCGGGTG GCAAGGTTGT CGCGTTGGAC GGGGCGGCGC GGCGGGTAGT CCAGCGCCAG GCACTCCAGC AAGGTCCCCC CTGCGTCGAC TAG
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Protein sequence | MKAVVIAGRT GLALLSVVVL VVTGYSWSTL RRVQESVNTT DVLTSLADVP NAPPADDGAI DLLLVGSDSR TDAQGNPLPA SVLRQLRTEA TDTLNTDTII VLRVPRDGSR AHAVSIPRDT YVPIPGDREE KINGAYGVTK FLTMERLQAE GVPLAEREKR GDQAGRAALV QVVQELTGVR VDHYAEVNLY GFYRLTEVIG GVDVCLKEAT SDPDSGADFR AGAQTLSGGD ALAFVRQRKN LPSGDLSRIT RQQVFLSSAM SKLLTAGTFA DPSKLSGLLE AVSKSVVVDD GLDVATLAGQ LGGLSGGNVE FATIPVTAVG AVNDRGQSVV LVDREQVRAF VARVLGEKTP EPTAPASSTA PASSEAAPTT SDAAPTTTER LSGGKVVALD GAARRVVQRQ ALQQGPPCVD
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