More than 300 homologs were found in PanDaTox collection
for query gene Snas_6317 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_6317  cell envelope-related transcriptional attenuator  100 
 
 
390 aa  809    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6385  cell envelope-related transcriptional attenuator  53.95 
 
 
358 aa  376  1e-103  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0942  cell envelope-related transcriptional attenuator  49.71 
 
 
349 aa  329  5.0000000000000004e-89  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.165177  normal  0.737127 
 
 
-
 
NC_013947  Snas_1681  cell envelope-related transcriptional attenuator  44.88 
 
 
357 aa  282  7.000000000000001e-75  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0240426  normal  0.562376 
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  44.03 
 
 
352 aa  281  2e-74  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4011  cell envelope-related transcriptional attenuator  32.55 
 
 
380 aa  189  7e-47  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000201414 
 
 
-
 
NC_009380  Strop_3629  transcription attenuator LytR  32.81 
 
 
378 aa  187  3e-46  Salinispora tropica CNB-440  Bacteria  normal  0.142384  normal 
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  30.36 
 
 
312 aa  155  9e-37  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  31.27 
 
 
358 aa  153  5e-36  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  29.97 
 
 
420 aa  133  5e-30  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  28.9 
 
 
414 aa  127  3e-28  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  28.94 
 
 
390 aa  107  3e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  28.1 
 
 
382 aa  96.3  7e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  28.82 
 
 
307 aa  91.7  2e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  28.37 
 
 
488 aa  91.7  2e-17  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  25.77 
 
 
362 aa  90.9  3e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  27.6 
 
 
732 aa  89  1e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  25.06 
 
 
377 aa  87.4  3e-16  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  24.65 
 
 
491 aa  86.7  7e-16  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  27.21 
 
 
333 aa  86.3  8e-16  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  24.83 
 
 
417 aa  85.1  0.000000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  30 
 
 
356 aa  85.1  0.000000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  25.81 
 
 
643 aa  84.7  0.000000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  23.73 
 
 
487 aa  84.7  0.000000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  28.01 
 
 
618 aa  84.7  0.000000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  26.94 
 
 
349 aa  84  0.000000000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  25.62 
 
 
512 aa  82.8  0.000000000000009  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  26.32 
 
 
395 aa  82.4  0.00000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  24.46 
 
 
480 aa  82.4  0.00000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  24.61 
 
 
442 aa  82.4  0.00000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  28.15 
 
 
489 aa  81.6  0.00000000000002  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  27.85 
 
 
530 aa  81.6  0.00000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  23.88 
 
 
497 aa  82  0.00000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  31 
 
 
393 aa  80.9  0.00000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  26.2 
 
 
1336 aa  80.9  0.00000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  27.72 
 
 
311 aa  81.3  0.00000000000003  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  26.13 
 
 
400 aa  80.9  0.00000000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  27.72 
 
 
311 aa  81.3  0.00000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  26.44 
 
 
443 aa  80.5  0.00000000000004  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_009972  Haur_1198  cell envelope-related transcriptional attenuator  27.49 
 
 
585 aa  80.5  0.00000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  31.3 
 
 
526 aa  80.5  0.00000000000005  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  27.72 
 
 
311 aa  80.5  0.00000000000005  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  28.24 
 
 
296 aa  80.1  0.00000000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  28.35 
 
 
320 aa  80.1  0.00000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  25.17 
 
 
521 aa  80.1  0.00000000000007  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  28.18 
 
 
353 aa  79.7  0.00000000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_011831  Cagg_3226  cell envelope-related transcriptional attenuator  27.31 
 
 
370 aa  79.7  0.00000000000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.501586 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  23.94 
 
 
517 aa  79.7  0.00000000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  29.66 
 
 
394 aa  79.7  0.00000000000008  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  26.71 
 
 
453 aa  79.7  0.00000000000009  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  23.16 
 
 
734 aa  79.3  0.0000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  28.95 
 
 
336 aa  78.6  0.0000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  26.62 
 
 
468 aa  77.8  0.0000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  25 
 
 
563 aa  77.4  0.0000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  24.91 
 
 
379 aa  77  0.0000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  27.62 
 
 
414 aa  77  0.0000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  27.99 
 
 
377 aa  76.6  0.0000000000007  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  25.44 
 
 
560 aa  76.6  0.0000000000007  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  28.23 
 
 
307 aa  76.6  0.0000000000007  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  25.66 
 
 
465 aa  76.3  0.0000000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  27.99 
 
 
377 aa  76.3  0.0000000000008  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  23.72 
 
 
410 aa  76.3  0.0000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  26.86 
 
 
545 aa  76.3  0.0000000000009  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  26.79 
 
 
481 aa  76.3  0.0000000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  26.41 
 
 
335 aa  75.9  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  28.36 
 
 
375 aa  75.9  0.000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  28.36 
 
 
375 aa  75.9  0.000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  28.36 
 
 
375 aa  75.9  0.000000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  29.37 
 
 
375 aa  75.9  0.000000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  28.36 
 
 
375 aa  75.9  0.000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  28.77 
 
 
407 aa  75.9  0.000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  27 
 
 
468 aa  75.9  0.000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  29.46 
 
 
326 aa  74.7  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  26.35 
 
 
584 aa  75.1  0.000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  24.24 
 
 
319 aa  75.5  0.000000000002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  25.59 
 
 
567 aa  75.5  0.000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  23.31 
 
 
373 aa  74.7  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  24.83 
 
 
379 aa  74.7  0.000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  26.38 
 
 
505 aa  74.3  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  25.55 
 
 
504 aa  74.7  0.000000000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  25.56 
 
 
516 aa  73.9  0.000000000005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  24.27 
 
 
322 aa  73.6  0.000000000006  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  24.78 
 
 
486 aa  72.4  0.00000000001  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  29.25 
 
 
434 aa  72.8  0.00000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_008530  LGAS_1157  transcriptional regulator  28.25 
 
 
334 aa  72.8  0.00000000001  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.000000000000266671  hitchhiker  6.72858e-19 
 
 
-
 
NC_013165  Shel_01950  cell envelope-related function transcriptional attenuator common domain protein  25.15 
 
 
516 aa  72  0.00000000002  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000132864  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  27.99 
 
 
409 aa  71.6  0.00000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  25.08 
 
 
381 aa  71.2  0.00000000003  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  23.19 
 
 
509 aa  71.2  0.00000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  25.5 
 
 
676 aa  71.2  0.00000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  28.93 
 
 
377 aa  71.2  0.00000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  23.42 
 
 
406 aa  71.2  0.00000000003  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  29.03 
 
 
313 aa  71.2  0.00000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03580  cell envelope-related function transcriptional attenuator common domain protein  28.5 
 
 
448 aa  70.5  0.00000000005  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.742286  normal  0.880699 
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  24.07 
 
 
412 aa  70.5  0.00000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  23.4 
 
 
478 aa  70.1  0.00000000007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  24.73 
 
 
365 aa  70.1  0.00000000007  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  25.93 
 
 
481 aa  70.1  0.00000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  28.7 
 
 
466 aa  70.1  0.00000000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  27.24 
 
 
372 aa  69.7  0.00000000008  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>