More than 300 homologs were found in PanDaTox collection
for query gene Shel_01950 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_01950  cell envelope-related function transcriptional attenuator common domain protein  100 
 
 
516 aa  1038    Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000132864  normal 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  58.2 
 
 
495 aa  369  1e-101  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  58.64 
 
 
490 aa  357  3.9999999999999996e-97  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  47.85 
 
 
512 aa  321  1.9999999999999998e-86  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  50.16 
 
 
443 aa  315  9.999999999999999e-85  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  45.2 
 
 
563 aa  300  3e-80  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013204  Elen_3081  cell envelope-related transcriptional attenuator  37.96 
 
 
531 aa  192  1e-47  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  41.11 
 
 
407 aa  188  3e-46  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_013204  Elen_2449  cell envelope-related transcriptional attenuator  34.92 
 
 
406 aa  148  3e-34  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00377769  normal 
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  30.2 
 
 
408 aa  140  3.9999999999999997e-32  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  30.16 
 
 
317 aa  140  4.999999999999999e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  32.43 
 
 
349 aa  139  1e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  36.13 
 
 
377 aa  138  2e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  38.81 
 
 
374 aa  139  2e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  36.55 
 
 
377 aa  137  3.0000000000000003e-31  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  31.34 
 
 
337 aa  135  9.999999999999999e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  36.13 
 
 
372 aa  135  9.999999999999999e-31  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  36.13 
 
 
374 aa  136  9.999999999999999e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  31.34 
 
 
338 aa  135  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  36.13 
 
 
375 aa  135  1.9999999999999998e-30  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  36.13 
 
 
375 aa  135  1.9999999999999998e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  33.96 
 
 
383 aa  135  1.9999999999999998e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  36.13 
 
 
375 aa  135  1.9999999999999998e-30  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  36.13 
 
 
375 aa  135  3e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  36.13 
 
 
375 aa  135  3e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  31.86 
 
 
319 aa  135  3e-30  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  29.58 
 
 
338 aa  134  3.9999999999999996e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  31.08 
 
 
584 aa  133  6.999999999999999e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  30.69 
 
 
453 aa  133  6.999999999999999e-30  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  36.12 
 
 
455 aa  133  6.999999999999999e-30  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  29.41 
 
 
337 aa  133  7.999999999999999e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  38.73 
 
 
307 aa  131  2.0000000000000002e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  30.28 
 
 
338 aa  132  2.0000000000000002e-29  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  30.28 
 
 
338 aa  132  2.0000000000000002e-29  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  30.53 
 
 
333 aa  129  1.0000000000000001e-28  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  32.39 
 
 
337 aa  129  1.0000000000000001e-28  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  32.39 
 
 
333 aa  129  1.0000000000000001e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  32.39 
 
 
338 aa  129  1.0000000000000001e-28  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  32.08 
 
 
399 aa  129  1.0000000000000001e-28  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  32.08 
 
 
399 aa  129  1.0000000000000001e-28  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  31.32 
 
 
400 aa  129  2.0000000000000002e-28  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  33.1 
 
 
362 aa  128  2.0000000000000002e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  30.77 
 
 
333 aa  128  3e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  30.77 
 
 
333 aa  128  3e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  30.77 
 
 
335 aa  128  3e-28  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  30.77 
 
 
333 aa  128  3e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  30.42 
 
 
335 aa  128  3e-28  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  30.77 
 
 
333 aa  128  3e-28  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  30.42 
 
 
333 aa  128  3e-28  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  31.98 
 
 
337 aa  127  4.0000000000000003e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  31.98 
 
 
337 aa  127  4.0000000000000003e-28  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  30.42 
 
 
333 aa  127  5e-28  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  33.77 
 
 
478 aa  127  6e-28  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  32.36 
 
 
329 aa  127  6e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  30.37 
 
 
419 aa  127  7e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  33.33 
 
 
316 aa  126  1e-27  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0368  hypothetical protein  32.08 
 
 
435 aa  125  2e-27  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  30.07 
 
 
333 aa  125  2e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  30.08 
 
 
509 aa  124  3e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0648  cell envelope-related transcriptional attenuator  29.48 
 
 
388 aa  124  3e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.500203  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  33.09 
 
 
468 aa  124  3e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  29.27 
 
 
400 aa  124  4e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  30.68 
 
 
401 aa  124  4e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  30.41 
 
 
411 aa  124  5e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  35.29 
 
 
475 aa  124  5e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  29.22 
 
 
497 aa  123  7e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  36.73 
 
 
453 aa  123  9e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_006274  BCZK0680  LytR family transcriptional regulator  30.04 
 
 
398 aa  123  9.999999999999999e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0015  cell envelope-related transcriptional attenuator  33.33 
 
 
503 aa  122  1.9999999999999998e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0348648  hitchhiker  0.0000779954 
 
 
-
 
NC_005945  BAS0746  LytR family transcription antiterminator  29.66 
 
 
398 aa  120  3.9999999999999996e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0694  LytR family transcriptional regulator  29.66 
 
 
398 aa  120  3.9999999999999996e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0354301  n/a   
 
 
-
 
NC_007530  GBAA_0783  LytR family transcription antiterminator  29.66 
 
 
398 aa  120  3.9999999999999996e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0878  transcription antiterminator, LytR family  29.66 
 
 
398 aa  121  3.9999999999999996e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.78734e-21 
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  34.03 
 
 
318 aa  121  3.9999999999999996e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  34.03 
 
 
318 aa  121  3.9999999999999996e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  30.77 
 
 
303 aa  120  4.9999999999999996e-26  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  30.77 
 
 
303 aa  120  4.9999999999999996e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_008261  CPF_0280  putative transcriptional regulator  33.7 
 
 
340 aa  120  6e-26  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1715  transcriptional regulator  28.48 
 
 
374 aa  120  6e-26  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00565214 
 
 
-
 
NC_008531  LEUM_1851  transcriptional regulator  30.86 
 
 
392 aa  120  7.999999999999999e-26  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  35.47 
 
 
390 aa  120  7.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  30.86 
 
 
426 aa  120  9e-26  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  29.97 
 
 
302 aa  119  9.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3381  LytR family transcription antiterminator  30.04 
 
 
345 aa  119  9.999999999999999e-26  Bacillus anthracis str. Sterne  Bacteria  normal  0.288134  n/a   
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  30.04 
 
 
345 aa  119  9.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  30.43 
 
 
303 aa  119  9.999999999999999e-26  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  30.43 
 
 
303 aa  119  9.999999999999999e-26  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_007530  GBAA_3647  LytR family transcription antiterminator  30.04 
 
 
345 aa  119  9.999999999999999e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0513784  n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  34.96 
 
 
436 aa  119  9.999999999999999e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3295  transcriptional regulator LytR, attenuator for lytABC and lytR expression  29.89 
 
 
345 aa  119  1.9999999999999998e-25  Bacillus cereus E33L  Bacteria  normal  0.189328  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  33.77 
 
 
480 aa  119  1.9999999999999998e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_011773  BCAH820_3598  transcription antiterminator, LytR family  30.04 
 
 
345 aa  119  1.9999999999999998e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000000156827 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  34.58 
 
 
405 aa  118  1.9999999999999998e-25  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  31.62 
 
 
356 aa  118  1.9999999999999998e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  36.28 
 
 
307 aa  117  3e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_008262  CPR_0271  cell envelope-related function transcriptional attenuator  33.33 
 
 
340 aa  118  3e-25  Clostridium perfringens SM101  Bacteria  normal  0.968761  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  35.45 
 
 
336 aa  117  3.9999999999999997e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  32.05 
 
 
353 aa  117  5e-25  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_009523  RoseRS_4519  cell envelope-related transcriptional attenuator  32.61 
 
 
505 aa  117  5e-25  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  29.19 
 
 
308 aa  117  6e-25  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
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