More than 300 homologs were found in PanDaTox collection
for query gene Bfae_20880 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  100 
 
 
296 aa  595  1e-169  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  52.84 
 
 
434 aa  284  1.0000000000000001e-75  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  53.19 
 
 
434 aa  284  1.0000000000000001e-75  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  52.86 
 
 
303 aa  280  2e-74  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  54.06 
 
 
363 aa  274  2.0000000000000002e-72  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  49.31 
 
 
313 aa  256  4e-67  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  41.31 
 
 
307 aa  217  2e-55  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  46.18 
 
 
407 aa  215  8e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  41.34 
 
 
320 aa  209  4e-53  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  40 
 
 
311 aa  195  7e-49  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  41.96 
 
 
336 aa  195  8.000000000000001e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  42.19 
 
 
394 aa  195  9e-49  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  39.93 
 
 
404 aa  194  1e-48  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  39.38 
 
 
489 aa  193  2e-48  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  40.21 
 
 
311 aa  194  2e-48  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  40.21 
 
 
311 aa  194  2e-48  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  41.04 
 
 
466 aa  189  2.9999999999999997e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  42.64 
 
 
404 aa  187  2e-46  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  46.15 
 
 
424 aa  184  2.0000000000000003e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  38.97 
 
 
306 aa  183  2.0000000000000003e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  37 
 
 
409 aa  184  2.0000000000000003e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  36.91 
 
 
393 aa  179  4.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  45.41 
 
 
307 aa  178  8e-44  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  40.51 
 
 
326 aa  174  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  35.96 
 
 
432 aa  168  1e-40  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  34.9 
 
 
390 aa  164  2.0000000000000002e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  37.22 
 
 
463 aa  160  2e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  33.89 
 
 
497 aa  153  2.9999999999999998e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  34.06 
 
 
486 aa  151  1e-35  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  40.93 
 
 
625 aa  151  1e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  33 
 
 
509 aa  150  3e-35  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  40.09 
 
 
573 aa  148  1.0000000000000001e-34  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  32.79 
 
 
512 aa  146  3e-34  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  37.55 
 
 
516 aa  145  1e-33  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  34.47 
 
 
504 aa  143  3e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  34.58 
 
 
505 aa  143  4e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  33.82 
 
 
468 aa  142  8e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  33.6 
 
 
545 aa  138  1e-31  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  34.66 
 
 
549 aa  137  3.0000000000000003e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  39.73 
 
 
491 aa  136  3.0000000000000003e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  36.47 
 
 
349 aa  136  4e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  33.44 
 
 
521 aa  132  5e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  33.59 
 
 
530 aa  132  6.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  35.1 
 
 
506 aa  131  1.0000000000000001e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  39.68 
 
 
453 aa  130  3e-29  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  32.44 
 
 
382 aa  130  3e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  38.14 
 
 
379 aa  129  4.0000000000000003e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  32.38 
 
 
481 aa  128  9.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  31.11 
 
 
618 aa  128  1.0000000000000001e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  34.25 
 
 
468 aa  127  2.0000000000000002e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  35.11 
 
 
414 aa  124  2e-27  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  33.79 
 
 
480 aa  124  2e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  38.55 
 
 
418 aa  124  3e-27  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  29.22 
 
 
478 aa  121  9.999999999999999e-27  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  30.58 
 
 
560 aa  122  9.999999999999999e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  39.76 
 
 
584 aa  121  9.999999999999999e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  32.95 
 
 
420 aa  120  1.9999999999999998e-26  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  32.78 
 
 
520 aa  120  3e-26  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  40 
 
 
319 aa  119  3.9999999999999996e-26  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  36.32 
 
 
414 aa  119  7e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  31.8 
 
 
732 aa  118  9.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  28.91 
 
 
400 aa  118  9.999999999999999e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  29.32 
 
 
481 aa  117  3e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  39.67 
 
 
414 aa  117  3e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  35.37 
 
 
453 aa  115  8.999999999999998e-25  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  34.07 
 
 
417 aa  114  2.0000000000000002e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  29.89 
 
 
522 aa  114  2.0000000000000002e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  37.79 
 
 
304 aa  114  3e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  33.47 
 
 
619 aa  113  4.0000000000000004e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  36.46 
 
 
419 aa  113  4.0000000000000004e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  33.33 
 
 
299 aa  113  5e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  36.02 
 
 
358 aa  112  5e-24  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  35.35 
 
 
381 aa  112  7.000000000000001e-24  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  37.17 
 
 
271 aa  112  9e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  33.63 
 
 
405 aa  112  1.0000000000000001e-23  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  35.48 
 
 
520 aa  110  2.0000000000000002e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  39.18 
 
 
383 aa  110  3e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  37.79 
 
 
304 aa  110  3e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  31.07 
 
 
493 aa  110  4.0000000000000004e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  37.21 
 
 
302 aa  109  5e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  30.9 
 
 
302 aa  109  5e-23  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  36.41 
 
 
356 aa  109  5e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  33.81 
 
 
487 aa  109  6e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  37.21 
 
 
303 aa  108  7.000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  37.21 
 
 
303 aa  109  7.000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  37.21 
 
 
303 aa  108  7.000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  33.85 
 
 
445 aa  109  7.000000000000001e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  34.63 
 
 
497 aa  108  8.000000000000001e-23  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  30 
 
 
493 aa  108  8.000000000000001e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  34.26 
 
 
377 aa  108  9.000000000000001e-23  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  32.34 
 
 
490 aa  108  1e-22  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  32.34 
 
 
490 aa  108  1e-22  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  32.34 
 
 
490 aa  108  1e-22  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  33.48 
 
 
312 aa  108  1e-22  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  31.22 
 
 
403 aa  107  2e-22  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  32.71 
 
 
499 aa  107  2e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  34 
 
 
567 aa  107  2e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  36.05 
 
 
303 aa  107  2e-22  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  29.09 
 
 
465 aa  107  3e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  36.47 
 
 
304 aa  107  3e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>