| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0411 |
|---|
| Symbol | |
|---|
| ID | 4485969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 427403 |
|---|
| End bp | 428965 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639729178 |
|---|
| Product | cell envelope-related transcriptional attenuator |
|---|
| Protein accession | YP_872171 |
|---|
| Protein GI | 117927620 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.118906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTC CCGCCTCTCC TCGCTCCCTT CTGGATCCGT TGGGCGAGGA GGCCGCGTAC
CAGCGGTCGA TGCGACGCCG GCGGATCGCG GGACGGGTCC TCGTCGGTTT CCTGGCGCTC
GTCGTCCTCG CCGGCGCCGT CGCCGCGGCC GGTATCCACA ACATCCTGAG CAAGGTGCGG
CATCAGCCCA GCCTCGACAC CGTGATCGGC GCAACCGCTC GGCCCAGCAA AGCCCCACCG
CCGGCGAGCG GCGGCAGCCC GGAGAACATC CTCGTCCTGG GTGTCGACAG CCGGCTGGGT
GAGAACTCCA GCTTCCAACC GACCACCGGC CCGGCGCAGA CGGAAACCCT CTCCGACACC
GCGATCCTCG TGCACCTGTC AGCCGACGGC AAACATGTCA CGTTGGTGAG CATCCCACGT
GACTCGGTGG TGAATATTCC GTCCTGCCGC CGGGTCGATG CCAACGGCCA ACCGCTGAGC
GACTCCGCGG GAAATCCGCT CTATACCAAG CCCGTGCAGG CGCTCTTCAA TGAAGCGATC
CAGCTCGGCG GACCGGCCTG CTCGGTCAAG ACGCTCGAAA CGCTCACCGG CATCTACATC
GACCACTATT TGGAGATTGA TTTCGAGGGC GTCATCAAAA TGTCCAATGC CCTCGGCGGC
GTGCCGTTGA CGATATGCTC ACCGATTCAC GACGCGCACA CCGGCCTGAA CCTGCCCGCC
GGGCCCGTGC TGCTGAAAGG ACAGCAAGCG CTGGCCTTCG TCCGGGCCCG GTACGGTCTG
ACCGGCGGGG ATGACCTGCA CCGGATCCAG CGGCAGCAGC AATTCATGGC CGCGATGGTG
CGCAAAGCGC TGAGTACGTC GAATTTCTTC GATCCCGTTC ACATGTACGA GTTCTACTCA
GCCGTCGCCG GCTCCATCAC CACGGACATG AGCAGCTCCC AGCTCATCAA CCTTGCGATG
CGCTACCGCC ACATCAACAC CCAGAACATC GTGTTCGCGA CGGTGCCGAC ATATCCGGCA
CCGAAGGGAG ACAAGTGGTA CTACCACCTG TACTGGAGTA CCGACGAAGC GGACCTGCTC
TTCCGTTACA TCCGCGATGA CCAGCCGCTC AACGCAACAC CGTCCGGCGG CCACAACGTC
GCGACAATCA CCGTGCCGCC GTCCGAGGTG ACGGTCGAAG TTCTGAACGG GACGGCGACC
AACGGCCTGG CCCGCCAAGT GGCCGACCAG CTCGCCGCCG AAGGGTTCCG CATCGCCGGT
GTCGGCAACG CCAGCTCGAT CCCAGTGGCG AAGACAACAA TTTCGTACCC CGCCAGCCGG
ACGGATTCGA TGAAGACCCT CGCCGGGGCT CTTGCCGTCA CCCCGCAGGA GACCCTCGAC
ACCAGCGCAA GCAATGTCCT CGTGCTGACC ATCGGAACGG ACTGGGCCGG GCTCGCCGCC
AGCTCGCCGA CCCCGTCCCC TGCGCTGTCC GCGTCACCCG GCTCCCCGTC CGCTACGCCG
TCGCTCGGGC CGCTCGGCGT GCCGACGACC AACGCCGCCG ACACCCAGTG CGTGCAAGGC
TGA
|
|---|
| Protein sequence | MKRPASPRSL LDPLGEEAAY QRSMRRRRIA GRVLVGFLAL VVLAGAVAAA GIHNILSKVR
HQPSLDTVIG ATARPSKAPP PASGGSPENI LVLGVDSRLG ENSSFQPTTG PAQTETLSDT
AILVHLSADG KHVTLVSIPR DSVVNIPSCR RVDANGQPLS DSAGNPLYTK PVQALFNEAI
QLGGPACSVK TLETLTGIYI DHYLEIDFEG VIKMSNALGG VPLTICSPIH DAHTGLNLPA
GPVLLKGQQA LAFVRARYGL TGGDDLHRIQ RQQQFMAAMV RKALSTSNFF DPVHMYEFYS
AVAGSITTDM SSSQLINLAM RYRHINTQNI VFATVPTYPA PKGDKWYYHL YWSTDEADLL
FRYIRDDQPL NATPSGGHNV ATITVPPSEV TVEVLNGTAT NGLARQVADQ LAAEGFRIAG
VGNASSIPVA KTTISYPASR TDSMKTLAGA LAVTPQETLD TSASNVLVLT IGTDWAGLAA
SSPTPSPALS ASPGSPSATP SLGPLGVPTT NAADTQCVQG
|
|---|
| |