| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7619 |
|---|
| Symbol | |
|---|
| ID | 8338995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8842040 |
|---|
| End bp | 8843179 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960703 |
|---|
| Product | cell envelope-related transcriptional attenuator |
|---|
| Protein accession | YP_003118284 |
|---|
| Protein GI | 256396720 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACC AGACCCAGCG CCCCCGGCGC CGCACCGGTC CAGACAGCGG CTCCATGTCC
CGCCGCAGGG TCGTCATCAT CTGCGCGGCC TCGCTGGCCG TACTGGCCGT CGCCGGCACG
ACCGGCCTGT GGACCATGTA CACCCGTTTG AACGACAACA TCCGCACGGT CGACATCCAC
GCCGACGACG CGCCGGGACC GGCGGACACC ATGAAGCCGC AGCCGGGGAG CCCGTCCTCC
AGCGCCCGCG CCTCGATGAA CGTCCTGCTC ATCGGCTCGG ACGACCGGGA CGGGGCGAAC
GCGCAGTACG GCGACGCCAA CTCCGGTGCC CGCTCGGACA CCACGATGCT GCTGCACGTG
GCCGCCGACC GGAAGAGCGC GACGGTCGCC TCGATCCCGC GCGACTCGAT GGTGCAGACG
CCGGCGTGCA CGAAGTCCGA CGGCACGCAG TCCCAGCCGC AGTTCGGGAT GTTCAACGCG
GCGTTCTCGA TCGGCGGGGC GGCGTGCACG GTGAAGACCG TCGAGACCCT CAGCGGTCTG
ACAGTCGACC ACGTCCTGGT CGTCGACTTC ACCGGCTTCA AGAAGATCAT CGACGCCATC
GGCGGCGTCC CGGTCCACCT GGACCAGGCG ATCGACGACC CCGACTCGCA CCTGAACCTG
CCGGCCGGGA CCACCGTGGT GGACGGCGAG CAGGCGCTGG CCTTCGTCCG CGCCCGCCAC
AACCTCGGCA ACGGCTCCGA CATCGGCCGC ATGAGCCGCC AGCAGGTGTT CCTGAACGAC
GCGCTGGACA CCATCACCGC CAACGGCACC CTGGACGACC CGGCGAAGCT CTACAAGGTC
CTGGACGCCG CCACCAAGGC CCTGACGACC GACCCGGCAC TCGGCTCGCT GCCGGCACTG
GCGGACTTCG CCTCGGACGT GAAGCAGGTC CCCCGGCAGC AGATCACGTA CCTGACAGTG
CCGTGGCAGT GGTACCAGCC GGACCCGAAC CGGGTGCAGC TGGCGCCCCT GGCGCAGGAG
CTGTTCACGG CGATGCTGCA GGACACGCCG GTGCCGGCGG AGGTGCTGGC GCTGGCGGCG
AAGCAGGGGG AACAGGTGAC GCCGGAAGAC GGCTCGCCCA ATGGCGCGCC TGGCTCTTAG
|
|---|
| Protein sequence | MDDQTQRPRR RTGPDSGSMS RRRVVIICAA SLAVLAVAGT TGLWTMYTRL NDNIRTVDIH
ADDAPGPADT MKPQPGSPSS SARASMNVLL IGSDDRDGAN AQYGDANSGA RSDTTMLLHV
AADRKSATVA SIPRDSMVQT PACTKSDGTQ SQPQFGMFNA AFSIGGAACT VKTVETLSGL
TVDHVLVVDF TGFKKIIDAI GGVPVHLDQA IDDPDSHLNL PAGTTVVDGE QALAFVRARH
NLGNGSDIGR MSRQQVFLND ALDTITANGT LDDPAKLYKV LDAATKALTT DPALGSLPAL
ADFASDVKQV PRQQITYLTV PWQWYQPDPN RVQLAPLAQE LFTAMLQDTP VPAEVLALAA
KQGEQVTPED GSPNGAPGS
|
|---|
| |