More than 300 homologs were found in PanDaTox collection
for query gene Ndas_3877 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  100 
 
 
497 aa  997    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  52.31 
 
 
509 aa  484  1e-135  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  40.23 
 
 
505 aa  356  3.9999999999999996e-97  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  41.65 
 
 
504 aa  342  1e-92  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  36.87 
 
 
549 aa  298  1e-79  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  43.88 
 
 
404 aa  231  2e-59  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  38.55 
 
 
491 aa  225  1e-57  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  42.07 
 
 
320 aa  221  1.9999999999999999e-56  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  34.25 
 
 
530 aa  218  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  32.87 
 
 
480 aa  216  9e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  33.06 
 
 
521 aa  214  1.9999999999999998e-54  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  31.02 
 
 
478 aa  212  1e-53  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  34.65 
 
 
481 aa  209  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  37.03 
 
 
584 aa  207  3e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  38.63 
 
 
409 aa  207  4e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  41.54 
 
 
336 aa  207  5e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  37.29 
 
 
307 aa  206  8e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  40 
 
 
306 aa  205  1e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  31.98 
 
 
468 aa  205  2e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  34.02 
 
 
468 aa  203  5e-51  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  40.82 
 
 
311 aa  202  9e-51  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  35.03 
 
 
465 aa  201  1.9999999999999998e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  40.82 
 
 
311 aa  202  1.9999999999999998e-50  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  40.82 
 
 
311 aa  202  1.9999999999999998e-50  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  33.11 
 
 
625 aa  201  3e-50  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  41.85 
 
 
466 aa  200  3.9999999999999996e-50  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  36.2 
 
 
453 aa  198  2.0000000000000003e-49  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  37.97 
 
 
390 aa  198  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  30.57 
 
 
618 aa  198  2.0000000000000003e-49  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  40.73 
 
 
326 aa  197  5.000000000000001e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  37.3 
 
 
463 aa  196  7e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  33.88 
 
 
573 aa  196  8.000000000000001e-49  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  32.53 
 
 
481 aa  195  2e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  40.22 
 
 
424 aa  193  6e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  40.33 
 
 
512 aa  192  2e-47  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  30.95 
 
 
545 aa  190  5e-47  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  28.94 
 
 
522 aa  190  5.999999999999999e-47  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  37.03 
 
 
486 aa  188  2e-46  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  32.02 
 
 
520 aa  186  1.0000000000000001e-45  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  36.63 
 
 
506 aa  184  2.0000000000000003e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  32.05 
 
 
1336 aa  183  6e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  38.7 
 
 
349 aa  182  2e-44  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  29.32 
 
 
732 aa  181  2e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  39.35 
 
 
394 aa  181  2e-44  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  37.33 
 
 
307 aa  180  4e-44  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  31.19 
 
 
520 aa  180  5.999999999999999e-44  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  38.15 
 
 
407 aa  178  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  39.81 
 
 
395 aa  178  2e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  35.1 
 
 
420 aa  176  9.999999999999999e-43  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  34.07 
 
 
400 aa  175  1.9999999999999998e-42  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  36.43 
 
 
404 aa  173  5.999999999999999e-42  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  34.2 
 
 
382 aa  171  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  33.22 
 
 
393 aa  172  2e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  28.99 
 
 
493 aa  170  4e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  32.54 
 
 
487 aa  169  1e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  29.9 
 
 
490 aa  168  2e-40  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  29.9 
 
 
490 aa  167  2.9999999999999998e-40  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  27.45 
 
 
734 aa  167  2.9999999999999998e-40  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  29.9 
 
 
490 aa  167  2.9999999999999998e-40  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  36.02 
 
 
434 aa  167  4e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  37.83 
 
 
395 aa  167  4e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  35.89 
 
 
434 aa  166  5.9999999999999996e-40  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  28.22 
 
 
493 aa  165  2.0000000000000002e-39  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  28.76 
 
 
497 aa  164  2.0000000000000002e-39  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  31.91 
 
 
410 aa  164  3e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  34.57 
 
 
414 aa  164  3e-39  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.93 
 
 
516 aa  164  4.0000000000000004e-39  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  29.65 
 
 
521 aa  164  4.0000000000000004e-39  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  34.52 
 
 
362 aa  163  8.000000000000001e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  29.58 
 
 
676 aa  162  9e-39  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  37.67 
 
 
381 aa  160  4e-38  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  29.29 
 
 
567 aa  160  4e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  33.24 
 
 
417 aa  158  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  31.75 
 
 
379 aa  157  6e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  31.75 
 
 
499 aa  155  2e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  37.5 
 
 
363 aa  155  2e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  30.5 
 
 
699 aa  155  2e-36  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  27.19 
 
 
405 aa  155  2e-36  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  30.5 
 
 
699 aa  155  2e-36  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  30.97 
 
 
551 aa  154  2.9999999999999998e-36  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  30.38 
 
 
701 aa  154  2.9999999999999998e-36  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  33.89 
 
 
296 aa  153  7e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  33.55 
 
 
489 aa  153  8.999999999999999e-36  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  31.56 
 
 
619 aa  152  1e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  35.83 
 
 
377 aa  152  2e-35  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  37.22 
 
 
313 aa  151  3e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  34.81 
 
 
560 aa  151  3e-35  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  33.33 
 
 
514 aa  150  4e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  36.39 
 
 
365 aa  150  4e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  39.51 
 
 
374 aa  150  6e-35  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  30.68 
 
 
526 aa  148  2.0000000000000003e-34  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  27.9 
 
 
684 aa  145  1e-33  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  32.65 
 
 
442 aa  145  2e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_03580  cell envelope-related function transcriptional attenuator common domain protein  38.36 
 
 
448 aa  144  3e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.742286  normal  0.880699 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  29.71 
 
 
649 aa  144  4e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  28.06 
 
 
538 aa  143  8e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  27.71 
 
 
496 aa  143  9e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  35.34 
 
 
396 aa  142  9.999999999999999e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  28.97 
 
 
517 aa  141  3e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  31.23 
 
 
319 aa  141  3e-32  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
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