More than 300 homologs were found in PanDaTox collection
for query gene Tfu_2567 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  100 
 
 
404 aa  805    Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  59.23 
 
 
463 aa  461  9.999999999999999e-129  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  55.1 
 
 
320 aa  338  8e-92  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  55.48 
 
 
326 aa  322  7e-87  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  53.24 
 
 
336 aa  309  6.999999999999999e-83  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  53.69 
 
 
424 aa  293  4e-78  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  47.98 
 
 
409 aa  291  1e-77  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  49.15 
 
 
306 aa  280  3e-74  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  50.17 
 
 
311 aa  276  4e-73  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  46.86 
 
 
307 aa  276  6e-73  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  50.17 
 
 
311 aa  275  8e-73  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  50.17 
 
 
311 aa  275  8e-73  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  47.47 
 
 
466 aa  267  2e-70  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  48.99 
 
 
307 aa  260  3e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  52.63 
 
 
407 aa  251  1e-65  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  45.93 
 
 
394 aa  250  3e-65  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  42.17 
 
 
497 aa  237  3e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  46.29 
 
 
404 aa  228  1e-58  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  38.11 
 
 
393 aa  214  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  43.34 
 
 
434 aa  211  1e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  41.14 
 
 
434 aa  211  2e-53  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  38.86 
 
 
505 aa  204  2e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  39.61 
 
 
296 aa  199  6e-50  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  40.33 
 
 
504 aa  199  6e-50  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  39.06 
 
 
509 aa  199  7e-50  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  44.49 
 
 
313 aa  192  1e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  39.52 
 
 
363 aa  184  2.0000000000000003e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  40.66 
 
 
303 aa  184  3e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  35.96 
 
 
489 aa  182  7e-45  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  32.13 
 
 
549 aa  176  6e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  39.51 
 
 
390 aa  172  6.999999999999999e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  34.29 
 
 
491 aa  158  2e-37  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  34.97 
 
 
486 aa  154  2e-36  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  34.03 
 
 
584 aa  154  2.9999999999999998e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  33.22 
 
 
573 aa  152  8.999999999999999e-36  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  34.31 
 
 
521 aa  152  8.999999999999999e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  36.19 
 
 
676 aa  152  1e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  34.16 
 
 
512 aa  152  1e-35  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  31.78 
 
 
625 aa  149  9e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  34.68 
 
 
453 aa  148  1.0000000000000001e-34  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  30.54 
 
 
432 aa  148  2.0000000000000003e-34  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  34.02 
 
 
567 aa  148  2.0000000000000003e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  36.62 
 
 
420 aa  148  2.0000000000000003e-34  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  35.79 
 
 
497 aa  145  1e-33  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  36.99 
 
 
490 aa  145  2e-33  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  36.99 
 
 
490 aa  145  2e-33  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  36.99 
 
 
490 aa  145  2e-33  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  35.78 
 
 
414 aa  144  3e-33  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  32.46 
 
 
522 aa  144  3e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  36.4 
 
 
481 aa  142  9.999999999999999e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  33.68 
 
 
493 aa  142  9.999999999999999e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  34.14 
 
 
732 aa  140  4.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  34.53 
 
 
410 aa  137  3.0000000000000003e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  35.86 
 
 
506 aa  137  3.0000000000000003e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  31.45 
 
 
545 aa  137  3.0000000000000003e-31  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  29.11 
 
 
400 aa  137  4e-31  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  35.06 
 
 
468 aa  135  9e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  31.06 
 
 
480 aa  135  9.999999999999999e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  36.86 
 
 
493 aa  135  9.999999999999999e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  29.44 
 
 
530 aa  134  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  33.21 
 
 
618 aa  134  3.9999999999999996e-30  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  31.34 
 
 
478 aa  133  5e-30  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  32.42 
 
 
468 aa  130  3e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  35.51 
 
 
481 aa  128  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  34.86 
 
 
358 aa  126  5e-28  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  30.16 
 
 
734 aa  126  7e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  33.94 
 
 
382 aa  126  7e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  33.8 
 
 
520 aa  125  1e-27  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  37.1 
 
 
395 aa  125  1e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  31.62 
 
 
516 aa  124  2e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  30.18 
 
 
319 aa  124  3e-27  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  35.34 
 
 
538 aa  124  3e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  35.48 
 
 
684 aa  123  6e-27  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  34.15 
 
 
419 aa  123  6e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  33.09 
 
 
312 aa  123  7e-27  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  30.72 
 
 
560 aa  123  7e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  28.09 
 
 
417 aa  122  8e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  34.77 
 
 
445 aa  122  1.9999999999999998e-26  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  36.36 
 
 
517 aa  121  1.9999999999999998e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  31.87 
 
 
418 aa  120  6e-26  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_009565  TBFG_13874  transcriptional regulator  57.14 
 
 
137 aa  119  9.999999999999999e-26  Mycobacterium tuberculosis F11  Bacteria  normal  0.0355258  normal 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  32.63 
 
 
619 aa  119  9.999999999999999e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  34.81 
 
 
395 aa  119  9.999999999999999e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  35.32 
 
 
381 aa  118  1.9999999999999998e-25  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  37.44 
 
 
514 aa  117  3e-25  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  31.69 
 
 
411 aa  117  3.9999999999999997e-25  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  30.77 
 
 
520 aa  116  6.9999999999999995e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  32.67 
 
 
403 aa  116  8.999999999999998e-25  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  30.42 
 
 
379 aa  115  2.0000000000000002e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  33.95 
 
 
382 aa  114  4.0000000000000004e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  29.11 
 
 
414 aa  114  4.0000000000000004e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  32.17 
 
 
442 aa  114  4.0000000000000004e-24  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  29.19 
 
 
540 aa  113  6e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  29.3 
 
 
465 aa  113  6e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  34.05 
 
 
405 aa  113  8.000000000000001e-24  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  31.42 
 
 
362 aa  112  8.000000000000001e-24  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_012803  Mlut_08810  cell envelope-related function transcriptional attenuator common domain protein  35.43 
 
 
374 aa  111  2.0000000000000002e-23  Micrococcus luteus NCTC 2665  Bacteria  normal  0.155806  n/a   
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  34.84 
 
 
396 aa  110  4.0000000000000004e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  40 
 
 
271 aa  110  5e-23  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  41.83 
 
 
389 aa  110  5e-23  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
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