Gene Caci_7541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7541 
Symbol 
ID8338911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8738324 
End bp8739946 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content70% 
IMG OID644960620 
Productcell envelope-related transcriptional attenuator 
Protein accessionYP_003118207 
Protein GI256396643 
COG category[K] Transcription 
COG ID[COG1316] Transcriptional regulator 
TIGRFAM ID[TIGR00350] cell envelope-related function transcriptional attenuator common domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.371514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACACTTCCGG CATAGCCGAC GACGAGACAT CCGACGCGGC CTGGATCCCG 
AAGCACTCAT CGGTCGCGCC CGCCGGGGGC AAGGACGGCA GGACCCGGCG GCGCGTCAAG
CGCACCCTGA TGATCCTGTC CGGGATGCTG GTGCTGGTCA TAGGCGGGAC CGTGGCCTAC
GCCGGCTACT GGTACTACCG CATCGACCAC AACATCAAGG GCGCGCCGCT GCACGGCGCG
GTGGTCCCGC CGGACCAGAT GGGCAGCGGC GAGATCGTGC AGCCGACCAA GGATCCGTAC
GGCGACGTCC CGATCAACAT CCTGCTCATC GGCACCGACG CCCGGCTGCC CGGCCAGGAC
GCGAGCCTGG GCGGCTTCAC CGATCCCTCG GGCCGCTCCG ACGTGGAGAT GCTGGTCCAC
GTCTCGGCCG ACCGCAGCAA CGCGACCGTG GTGTCGCTGC CGCGCGACAC CATGATCCCG
ATCCCGGCGT GCGTGGACGC CAAGGGCAAC CACTACGCGG CGCAGAGCAT CGGCATGATC
AACTCCGCGC TCGCCGCCGG TCCCGGCTGC CAGGTGGACA CCGTCGAGGA GTTCACCCAC
GTCAAGATCG ACCACTTCAT GATGGTCGAC TTCGCCGGCG TGGTGGCGCT GACCAACGCC
GTCGGCGGCG TCCCGGTCTG TGTGACCAAG GCGGTCAACG ACCCGGACTC GCACCTGACC
CTCCCGGCCG GCACCTCGAC GGTCCAGGGC GACATGGCGC TGGCCTTCCT GCGCACCCGT
GAAGGGTTCG CCGACGGCAC GGACCTGTAC CGCACCCAGG CGCAGCACCA GTACATGGCA
GCCCTGATCC GCAAGATGAA GGACCAGGCG ACCCTGGACA ACCCGCTCCA GGCCACGCAC
CTGATGGACA TCGCCTCCAA GTCGCTGACC GTGGACGACG ACATAGCCAG CGTCGGGAAG
CTGCTGGACC TGGCGAACAC GCTCAAGAAG GTCCCGACCC AGAACATCAC CTTCCTGACC
ATGCCGACCG TCCCCTACGC GCCGGACCAC AACCGCGTGT CCCCGGACAC CGACCTGGAC
GACCAGATCT TCTCCCTGCT CGCGCACGAC CAATCGGTCA CCGGCCCGAG CACGGTGGCC
GCCACGGGTG CGGGCACCAC GCCCGGCACG CCGTCCCCGA CCCCGACGGC GACCTCCAGC
GCGCTGAGCC CGAGCGCCGT CACCGACCCG ATCATCGTCG AGAACGGCAC GACCAACGAC
GGCCGCTCGC GCCAGCTCGC CTCCACCCTG CAAGCCGACG GCTTCAAGAA CACCTCCGGC
GTCAGCTACA ACGGCGACGT CGACACCACG ACGGTCTTCT ACAGCAGTCC CGCGCACCAG
GCCGCCGCGC AGGCGGTAGC CACCGCGCTC CAGCTGCCCG CGTCCGCCGT GCAGGCCGGC
GGGGACGGCA GCGCGCCGAT CGTGGTGCGG GTGGGTTCGG ACTTCGCCAG CGGCGACGTG
TACAACCCGG GCGCGGCTTC CTCCTCGAGC GCGCCGAGCG CGCTGCCGTC GGCGGCGCTG
TCCAGTGCCG ACGGGGAGAA CGCCGCCGAC CCGAACCTGT GCGTCTCGGC GGCTGGGTCG
TGA
 
Protein sequence
MSDDTSGIAD DETSDAAWIP KHSSVAPAGG KDGRTRRRVK RTLMILSGML VLVIGGTVAY 
AGYWYYRIDH NIKGAPLHGA VVPPDQMGSG EIVQPTKDPY GDVPINILLI GTDARLPGQD
ASLGGFTDPS GRSDVEMLVH VSADRSNATV VSLPRDTMIP IPACVDAKGN HYAAQSIGMI
NSALAAGPGC QVDTVEEFTH VKIDHFMMVD FAGVVALTNA VGGVPVCVTK AVNDPDSHLT
LPAGTSTVQG DMALAFLRTR EGFADGTDLY RTQAQHQYMA ALIRKMKDQA TLDNPLQATH
LMDIASKSLT VDDDIASVGK LLDLANTLKK VPTQNITFLT MPTVPYAPDH NRVSPDTDLD
DQIFSLLAHD QSVTGPSTVA ATGAGTTPGT PSPTPTATSS ALSPSAVTDP IIVENGTTND
GRSRQLASTL QADGFKNTSG VSYNGDVDTT TVFYSSPAHQ AAAQAVATAL QLPASAVQAG
GDGSAPIVVR VGSDFASGDV YNPGAASSSS APSALPSAAL SSADGENAAD PNLCVSAAGS