Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7541 |
Symbol | |
ID | 8338911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8738324 |
End bp | 8739946 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960620 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_003118207 |
Protein GI | 256396643 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.371514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG ACACTTCCGG CATAGCCGAC GACGAGACAT CCGACGCGGC CTGGATCCCG AAGCACTCAT CGGTCGCGCC CGCCGGGGGC AAGGACGGCA GGACCCGGCG GCGCGTCAAG CGCACCCTGA TGATCCTGTC CGGGATGCTG GTGCTGGTCA TAGGCGGGAC CGTGGCCTAC GCCGGCTACT GGTACTACCG CATCGACCAC AACATCAAGG GCGCGCCGCT GCACGGCGCG GTGGTCCCGC CGGACCAGAT GGGCAGCGGC GAGATCGTGC AGCCGACCAA GGATCCGTAC GGCGACGTCC CGATCAACAT CCTGCTCATC GGCACCGACG CCCGGCTGCC CGGCCAGGAC GCGAGCCTGG GCGGCTTCAC CGATCCCTCG GGCCGCTCCG ACGTGGAGAT GCTGGTCCAC GTCTCGGCCG ACCGCAGCAA CGCGACCGTG GTGTCGCTGC CGCGCGACAC CATGATCCCG ATCCCGGCGT GCGTGGACGC CAAGGGCAAC CACTACGCGG CGCAGAGCAT CGGCATGATC AACTCCGCGC TCGCCGCCGG TCCCGGCTGC CAGGTGGACA CCGTCGAGGA GTTCACCCAC GTCAAGATCG ACCACTTCAT GATGGTCGAC TTCGCCGGCG TGGTGGCGCT GACCAACGCC GTCGGCGGCG TCCCGGTCTG TGTGACCAAG GCGGTCAACG ACCCGGACTC GCACCTGACC CTCCCGGCCG GCACCTCGAC GGTCCAGGGC GACATGGCGC TGGCCTTCCT GCGCACCCGT GAAGGGTTCG CCGACGGCAC GGACCTGTAC CGCACCCAGG CGCAGCACCA GTACATGGCA GCCCTGATCC GCAAGATGAA GGACCAGGCG ACCCTGGACA ACCCGCTCCA GGCCACGCAC CTGATGGACA TCGCCTCCAA GTCGCTGACC GTGGACGACG ACATAGCCAG CGTCGGGAAG CTGCTGGACC TGGCGAACAC GCTCAAGAAG GTCCCGACCC AGAACATCAC CTTCCTGACC ATGCCGACCG TCCCCTACGC GCCGGACCAC AACCGCGTGT CCCCGGACAC CGACCTGGAC GACCAGATCT TCTCCCTGCT CGCGCACGAC CAATCGGTCA CCGGCCCGAG CACGGTGGCC GCCACGGGTG CGGGCACCAC GCCCGGCACG CCGTCCCCGA CCCCGACGGC GACCTCCAGC GCGCTGAGCC CGAGCGCCGT CACCGACCCG ATCATCGTCG AGAACGGCAC GACCAACGAC GGCCGCTCGC GCCAGCTCGC CTCCACCCTG CAAGCCGACG GCTTCAAGAA CACCTCCGGC GTCAGCTACA ACGGCGACGT CGACACCACG ACGGTCTTCT ACAGCAGTCC CGCGCACCAG GCCGCCGCGC AGGCGGTAGC CACCGCGCTC CAGCTGCCCG CGTCCGCCGT GCAGGCCGGC GGGGACGGCA GCGCGCCGAT CGTGGTGCGG GTGGGTTCGG ACTTCGCCAG CGGCGACGTG TACAACCCGG GCGCGGCTTC CTCCTCGAGC GCGCCGAGCG CGCTGCCGTC GGCGGCGCTG TCCAGTGCCG ACGGGGAGAA CGCCGCCGAC CCGAACCTGT GCGTCTCGGC GGCTGGGTCG TGA
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Protein sequence | MSDDTSGIAD DETSDAAWIP KHSSVAPAGG KDGRTRRRVK RTLMILSGML VLVIGGTVAY AGYWYYRIDH NIKGAPLHGA VVPPDQMGSG EIVQPTKDPY GDVPINILLI GTDARLPGQD ASLGGFTDPS GRSDVEMLVH VSADRSNATV VSLPRDTMIP IPACVDAKGN HYAAQSIGMI NSALAAGPGC QVDTVEEFTH VKIDHFMMVD FAGVVALTNA VGGVPVCVTK AVNDPDSHLT LPAGTSTVQG DMALAFLRTR EGFADGTDLY RTQAQHQYMA ALIRKMKDQA TLDNPLQATH LMDIASKSLT VDDDIASVGK LLDLANTLKK VPTQNITFLT MPTVPYAPDH NRVSPDTDLD DQIFSLLAHD QSVTGPSTVA ATGAGTTPGT PSPTPTATSS ALSPSAVTDP IIVENGTTND GRSRQLASTL QADGFKNTSG VSYNGDVDTT TVFYSSPAHQ AAAQAVATAL QLPASAVQAG GDGSAPIVVR VGSDFASGDV YNPGAASSSS APSALPSAAL SSADGENAAD PNLCVSAAGS
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