More than 300 homologs were found in PanDaTox collection
for query gene Tbis_0046 on replicon NC_014165
Organism: Thermobispora bispora DSM 43833



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  100 
 
 
320 aa  642    Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  75.6 
 
 
326 aa  439  9.999999999999999e-123  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  55.1 
 
 
404 aa  338  7e-92  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  55.1 
 
 
336 aa  324  1e-87  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  59.66 
 
 
424 aa  320  1.9999999999999998e-86  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  51.42 
 
 
409 aa  305  5.0000000000000004e-82  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  53.31 
 
 
306 aa  303  2.0000000000000002e-81  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  49.03 
 
 
463 aa  301  8.000000000000001e-81  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  52.76 
 
 
311 aa  291  7e-78  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  52.4 
 
 
311 aa  291  1e-77  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  52.4 
 
 
311 aa  291  1e-77  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  49.5 
 
 
307 aa  282  4.0000000000000003e-75  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  50.17 
 
 
307 aa  278  6e-74  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  50.16 
 
 
466 aa  275  1.0000000000000001e-72  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  53.7 
 
 
407 aa  269  4e-71  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  46.93 
 
 
394 aa  267  2e-70  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_008699  Noca_1395  cell envelope-related transcriptional attenuator  46.83 
 
 
404 aa  243  3e-63  Nocardioides sp. JS614  Bacteria  normal  0.330473  n/a   
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  45.1 
 
 
393 aa  236  3e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  40.51 
 
 
497 aa  221  9e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  41.41 
 
 
296 aa  212  5.999999999999999e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  44.76 
 
 
434 aa  212  7.999999999999999e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  41.75 
 
 
434 aa  209  7e-53  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  38.02 
 
 
509 aa  206  3e-52  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2595  cell envelope-related transcriptional attenuator  44.49 
 
 
313 aa  202  8e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  42 
 
 
504 aa  198  7.999999999999999e-50  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  39.62 
 
 
489 aa  197  3e-49  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_012669  Bcav_1165  cell envelope-related protein transcriptional attenuator  43.55 
 
 
363 aa  193  3e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  37.58 
 
 
505 aa  186  6e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  42.04 
 
 
303 aa  184  2.0000000000000003e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  40.7 
 
 
390 aa  176  5e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  39.36 
 
 
549 aa  171  2e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  40.54 
 
 
512 aa  169  4e-41  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  36.86 
 
 
414 aa  166  2.9999999999999998e-40  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  43.66 
 
 
491 aa  166  6.9999999999999995e-40  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  39.86 
 
 
625 aa  165  1.0000000000000001e-39  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  41.18 
 
 
481 aa  162  6e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  34.21 
 
 
432 aa  162  8.000000000000001e-39  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  37.77 
 
 
486 aa  162  9e-39  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  42.53 
 
 
573 aa  161  1e-38  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  39.31 
 
 
420 aa  162  1e-38  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  35.05 
 
 
478 aa  160  3e-38  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  34.59 
 
 
545 aa  157  2e-37  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  33.91 
 
 
382 aa  155  1e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  37.73 
 
 
453 aa  153  2.9999999999999998e-36  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  40.08 
 
 
560 aa  153  4e-36  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  36.27 
 
 
522 aa  153  5e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  33.83 
 
 
410 aa  152  8e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  36.93 
 
 
468 aa  151  1e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  34.66 
 
 
521 aa  151  1e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  37.81 
 
 
516 aa  149  8e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  35.6 
 
 
349 aa  148  9e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  37.27 
 
 
618 aa  147  3e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  35.12 
 
 
732 aa  144  3e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  33.84 
 
 
468 aa  143  3e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  35.59 
 
 
530 aa  141  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  34.33 
 
 
480 aa  141  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  36.76 
 
 
481 aa  140  3e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  42.47 
 
 
419 aa  140  3.9999999999999997e-32  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  36.43 
 
 
445 aa  139  8.999999999999999e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  31.02 
 
 
400 aa  139  8.999999999999999e-32  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  30.22 
 
 
584 aa  137  3.0000000000000003e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  34.8 
 
 
567 aa  137  3.0000000000000003e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  39.38 
 
 
520 aa  136  4e-31  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  35.19 
 
 
538 aa  135  9.999999999999999e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  33.81 
 
 
319 aa  134  1.9999999999999998e-30  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  35.29 
 
 
676 aa  132  6e-30  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  32.32 
 
 
414 aa  132  6e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  38.61 
 
 
506 aa  132  1.0000000000000001e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  34.95 
 
 
465 aa  131  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  37.79 
 
 
377 aa  131  2.0000000000000002e-29  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  34.23 
 
 
520 aa  131  2.0000000000000002e-29  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  34.88 
 
 
381 aa  129  5.0000000000000004e-29  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  31.41 
 
 
540 aa  129  9.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  33.56 
 
 
379 aa  129  9.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  32.65 
 
 
497 aa  128  1.0000000000000001e-28  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  33.33 
 
 
411 aa  127  2.0000000000000002e-28  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  35.06 
 
 
418 aa  126  5e-28  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  33.87 
 
 
490 aa  124  1e-27  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  33.87 
 
 
490 aa  124  1e-27  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  35.04 
 
 
517 aa  125  1e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  33.87 
 
 
490 aa  124  1e-27  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  32.67 
 
 
362 aa  124  2e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  41.36 
 
 
490 aa  124  2e-27  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  33.47 
 
 
493 aa  124  2e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  33.57 
 
 
358 aa  124  2e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13874  transcriptional regulator  56.48 
 
 
137 aa  124  2e-27  Mycobacterium tuberculosis F11  Bacteria  normal  0.0355258  normal 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  33.33 
 
 
493 aa  123  4e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  36.99 
 
 
643 aa  123  5e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  36.21 
 
 
395 aa  123  5e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  37.56 
 
 
514 aa  122  6e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  33.81 
 
 
619 aa  122  6e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  31.25 
 
 
512 aa  122  9.999999999999999e-27  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  36.12 
 
 
395 aa  121  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  37.18 
 
 
526 aa  120  3.9999999999999996e-26  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  35.74 
 
 
377 aa  119  9e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5265  cell envelope-related transcriptional attenuator  34.82 
 
 
414 aa  119  9e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.534178 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  43.05 
 
 
304 aa  118  9.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  37.77 
 
 
443 aa  118  9.999999999999999e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  37.23 
 
 
453 aa  118  1.9999999999999998e-25  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_013124  Afer_1145  cell envelope-related transcriptional attenuator  34.31 
 
 
543 aa  117  1.9999999999999998e-25  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>