| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5902 |
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| Symbol | |
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| ID | 5674223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 7169379 |
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| End bp | 7171256 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641244750 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_001510152 |
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| Protein GI | 158317644 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCG CTGGACCGCG CGCCTCGACA GGGCCCCGAC AGTGGCCTGA GTCGCCCCGC
ACCGGCTCCG ACCCCGCAGC GGGCGGGCGG CGCCGGCCGA GGTCACGGCC GCACGCACGC
TCGCGCCAGC GCGAGGTCAC CCACTCGAAC CAGGACGGGT CGGAGACCGA GCTCACCGAG
CCGAGACCGA ACCAGCGCCG CGGCGGCTGG GACAGGCTCC AGCGCCGGAA CCCGGGCGAG
GCCGGCCCGG ACGCCCGAAC CCGGGAGCAG CACCTGGAGC AGAGTCAGGA CCACGCCCAG
GACGGCGTCC ACGACGACAC CACCGACCAC GACCACAGCA CCGACCACGG CCACGGCCAC
GGCCACGGCC ACGGGTCAGG GTGGCTCCCG GGGTCGGCCG GTCGGCGGCG TGGCGTGGCG
TCGCGGCTCG CCGTCGTCGT CTCCGCCATC CTGTCGTGCC TGATCTTCGC CTTCGCCGTC
GGCGGGTTCG CCGTCTACGA GCACTTCGAC CGCCAGATCA ACCGGCTGCG GCTGAGCCTG
GACGGCGACC GGCCCGCAAG CCCCGTCGAG GGGACGACCA ACTTCCTGCT CGTCGGCTCG
GACAGCCGGG CCGGCACCGG GGGCGAGTTC CAGCGCGGCG GCAAGGTCGC CGGCCAGCGT
TCGGACACCA CGATCCTCGC CCACCTCGAC GCGAACGGGA CGACGACCCT GGTGTCGTTC
CCGCGCGACA CCCTCGTGCG CATCCCCGGG CACGGCCGGG ACAAGCTGAC CCAGGCGATC
TCCATCGGGG GCCCGGGGCT GCTGGTCCGG ACCATCGAGA ACCTCACCGA CATCCGTGTC
GACCACTACG TGTCGGTCGA CCTCGCCGGG TTCCGCGAGA TGACCGACGC GATCGGCGGG
GTCACGGTCT GTGTGAAGGC GCTGCCGGAC GGGCGGCGGA CGAACCTGCG TGACGAGTGG
TCCCAGTGGC GGGGGCGGGT CGGCGAGAAC CACCTGACCG GCGACCAGGC CCTCGCGTTC
GTCCGCCAGC GCCACGGCCT GCCCGACAAC GACTTCGACC GCATCCGCCG GCAGCAGCAG
TTCATCGGGG CGGTCTTCCG CAAGGCCACC AGCGACGGCG TGCTGACGAG CCCGGCCCGG
CTGGAGAACC TGATCAGCGC GGTGACGCGG GCGCTGACCA TCGACGACGG AACGGACATC
GAGGATCTCC GGCTGCTCGC GAAGCGGATG GGGTCGATGA GCTCCGACCA GATCAGGTTC
GTGACGATCC CCGTGCACGC GCCGTCGCCG GCCGAGGGCG GGAACGCGCT CGGCGAGCTG
CCCCGGTTCG GTTCCGTGCA GCTTTACGAC CAGGCGCAGC TCGACGCGTT CCTGGCGCCG
CTGCGCGGCC GGGACGGCAC CAGCCCGACG GCCGTCCCCG CCCCGCCGGC GTCGCCCCCG
GGCGAGGTTT CCGTCGACGT GTTCAACGCC GCGCGGGTCG GGGGGCTCGC AGCGGCCGTG
CGCAGTGACC TCGCCAGTCT CGGGTTCCGC GTCGGAACCC CGCGGGACTG GCCCGCCGGC
TCGCTGCAGA CCAGCGAGGT GCGGTACGGG CCCGGCGGCG AGGCGGCGGC GCGCGCCGTG
CGGGCCGTCG TGCCCGACGC CAGGCTTGTC CGCGACGACG ACCTGGCCGA CCGGATCTCC
CTGGTGCTGG GCGAGTCGTT CGAGAAGGTG GACGCGACCG GCGTCCCCGC GGCCGGGGCC
CGAGCGGTCT CCGGTATGCG CCCGTCGGCA CCGGGCAGCG CCTCGACGGG GTCCGCGGGC
CCGGCCCTGT CCGGAGCCCC CACCAGGCCG ACCGCCCCGG TGACGGCGAC CGAGCTGACC
ACCGGCTGCA CGTACTGA
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| Protein sequence | MTGAGPRAST GPRQWPESPR TGSDPAAGGR RRPRSRPHAR SRQREVTHSN QDGSETELTE
PRPNQRRGGW DRLQRRNPGE AGPDARTREQ HLEQSQDHAQ DGVHDDTTDH DHSTDHGHGH
GHGHGSGWLP GSAGRRRGVA SRLAVVVSAI LSCLIFAFAV GGFAVYEHFD RQINRLRLSL
DGDRPASPVE GTTNFLLVGS DSRAGTGGEF QRGGKVAGQR SDTTILAHLD ANGTTTLVSF
PRDTLVRIPG HGRDKLTQAI SIGGPGLLVR TIENLTDIRV DHYVSVDLAG FREMTDAIGG
VTVCVKALPD GRRTNLRDEW SQWRGRVGEN HLTGDQALAF VRQRHGLPDN DFDRIRRQQQ
FIGAVFRKAT SDGVLTSPAR LENLISAVTR ALTIDDGTDI EDLRLLAKRM GSMSSDQIRF
VTIPVHAPSP AEGGNALGEL PRFGSVQLYD QAQLDAFLAP LRGRDGTSPT AVPAPPASPP
GEVSVDVFNA ARVGGLAAAV RSDLASLGFR VGTPRDWPAG SLQTSEVRYG PGGEAAARAV
RAVVPDARLV RDDDLADRIS LVLGESFEKV DATGVPAAGA RAVSGMRPSA PGSASTGSAG
PALSGAPTRP TAPVTATELT TGCTY
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