More than 300 homologs were found in PanDaTox collection
for query gene Ccur_08290 on replicon NC_013170
Organism: Cryptobacterium curtum DSM 15641



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  100 
 
 
443 aa  903    Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  60.11 
 
 
512 aa  439  9.999999999999999e-123  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  52.81 
 
 
495 aa  363  3e-99  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  54.45 
 
 
490 aa  316  5e-85  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  45.76 
 
 
563 aa  307  3e-82  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013165  Shel_01950  cell envelope-related function transcriptional attenuator common domain protein  45.5 
 
 
516 aa  301  2e-80  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000132864  normal 
 
 
-
 
NC_013204  Elen_3081  cell envelope-related transcriptional attenuator  37.29 
 
 
531 aa  186  5e-46  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  34.5 
 
 
407 aa  166  1.0000000000000001e-39  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  36.3 
 
 
349 aa  142  1.9999999999999998e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2449  cell envelope-related transcriptional attenuator  34.15 
 
 
406 aa  141  3e-32  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00377769  normal 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  32.31 
 
 
419 aa  136  7.000000000000001e-31  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  34.51 
 
 
375 aa  136  9e-31  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  34.07 
 
 
377 aa  135  9.999999999999999e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  34.07 
 
 
375 aa  135  9.999999999999999e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  34.07 
 
 
375 aa  135  9.999999999999999e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  34.07 
 
 
375 aa  135  9.999999999999999e-31  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  34.07 
 
 
375 aa  135  9.999999999999999e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1893  transcriptional regulator, putative  34.57 
 
 
316 aa  134  1.9999999999999998e-30  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  34.8 
 
 
374 aa  134  3e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  29.41 
 
 
383 aa  134  3e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  33.19 
 
 
377 aa  134  3.9999999999999996e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  34.07 
 
 
374 aa  134  3.9999999999999996e-30  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  38.18 
 
 
307 aa  133  6.999999999999999e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  34.07 
 
 
372 aa  132  9e-30  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  35.44 
 
 
497 aa  132  1.0000000000000001e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  33.56 
 
 
411 aa  131  2.0000000000000002e-29  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  34.73 
 
 
403 aa  131  3e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  28.96 
 
 
317 aa  130  4.0000000000000003e-29  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  37.09 
 
 
445 aa  129  9.000000000000001e-29  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  34.8 
 
 
453 aa  129  1.0000000000000001e-28  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  35.37 
 
 
455 aa  129  1.0000000000000001e-28  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  31.1 
 
 
362 aa  128  2.0000000000000002e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  32.52 
 
 
345 aa  128  2.0000000000000002e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  34.42 
 
 
390 aa  128  3e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0378  transcriptional regulator  32.38 
 
 
408 aa  126  8.000000000000001e-28  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.0016641  n/a   
 
 
-
 
NC_011658  BCAH187_A0946  transcription antiterminator, LytR family  32.34 
 
 
400 aa  125  2e-27  Bacillus cereus AH187  Bacteria  hitchhiker  0.00000012569  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  34.18 
 
 
353 aa  124  3e-27  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_008261  CPF_0280  putative transcriptional regulator  32.68 
 
 
340 aa  124  4e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  30 
 
 
337 aa  124  4e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4498  transcription antiterminator, LytR family  32.47 
 
 
399 aa  124  4e-27  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000000000182536 
 
 
-
 
NC_011725  BCB4264_A0838  transcription antiterminator, LytR family  32.47 
 
 
399 aa  124  5e-27  Bacillus cereus B4264  Bacteria  hitchhiker  0.00382216  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  34.15 
 
 
505 aa  123  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  30.84 
 
 
319 aa  123  6e-27  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_008262  CPR_0271  cell envelope-related function transcriptional attenuator  32.25 
 
 
340 aa  122  9.999999999999999e-27  Clostridium perfringens SM101  Bacteria  normal  0.968761  n/a   
 
 
-
 
NC_010320  Teth514_2233  cell envelope-related transcriptional attenuator  31.68 
 
 
303 aa  122  1.9999999999999998e-26  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1851  transcriptional regulator  32.85 
 
 
392 aa  122  1.9999999999999998e-26  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3605  LytR family transcription antiterminator  31.14 
 
 
345 aa  121  3e-26  Bacillus cereus ATCC 10987  Bacteria  normal  0.0149783  n/a   
 
 
-
 
NC_011773  BCAH820_3598  transcription antiterminator, LytR family  31.88 
 
 
345 aa  120  3e-26  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000000000000156827 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  33.33 
 
 
356 aa  121  3e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_011658  BCAH187_A3613  transcription antiterminator, LytR family  31.14 
 
 
345 aa  121  3e-26  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276906  n/a   
 
 
-
 
NC_005945  BAS3381  LytR family transcription antiterminator  31.88 
 
 
345 aa  120  3.9999999999999996e-26  Bacillus anthracis str. Sterne  Bacteria  normal  0.288134  n/a   
 
 
-
 
NC_007530  GBAA_3647  LytR family transcription antiterminator  31.88 
 
 
345 aa  120  3.9999999999999996e-26  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0513784  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  32.59 
 
 
318 aa  120  3.9999999999999996e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  32.59 
 
 
318 aa  120  3.9999999999999996e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  37.78 
 
 
468 aa  120  4.9999999999999996e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  30.22 
 
 
302 aa  120  7e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  34.63 
 
 
466 aa  119  9e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  39.06 
 
 
320 aa  119  9.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK3295  transcriptional regulator LytR, attenuator for lytABC and lytR expression  31.52 
 
 
345 aa  119  9.999999999999999e-26  Bacillus cereus E33L  Bacteria  normal  0.189328  n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  34.68 
 
 
436 aa  119  9.999999999999999e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  32.31 
 
 
329 aa  119  9.999999999999999e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_003909  BCE_0875  LytR family transcription antiterminator  31 
 
 
400 aa  118  1.9999999999999998e-25  Bacillus cereus ATCC 10987  Bacteria  normal  0.0676567  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  28.35 
 
 
333 aa  119  1.9999999999999998e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  28.35 
 
 
333 aa  119  1.9999999999999998e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  28.35 
 
 
335 aa  119  1.9999999999999998e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  28.35 
 
 
333 aa  119  1.9999999999999998e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  27.55 
 
 
333 aa  118  1.9999999999999998e-25  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  28.35 
 
 
333 aa  119  1.9999999999999998e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  27.55 
 
 
335 aa  117  3e-25  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  33.19 
 
 
405 aa  117  3e-25  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0694  cell envelope-related transcriptional attenuator  31.23 
 
 
401 aa  117  3e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.12922  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  28.35 
 
 
333 aa  117  3.9999999999999997e-25  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  32.52 
 
 
337 aa  116  6e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0680  LytR family transcriptional regulator  31 
 
 
398 aa  116  6e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1619  transcription antiterminator, LytR family  31.77 
 
 
345 aa  116  7.999999999999999e-25  Bacillus cereus G9842  Bacteria  hitchhiker  0.00116574  hitchhiker  0.0000348163 
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  27.55 
 
 
333 aa  116  7.999999999999999e-25  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  31.28 
 
 
338 aa  116  8.999999999999998e-25  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  27.55 
 
 
333 aa  116  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  34.96 
 
 
426 aa  115  1.0000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_008262  CPR_0598  cell envelope-related function transcriptional attenuator  28.76 
 
 
337 aa  115  1.0000000000000001e-24  Clostridium perfringens SM101  Bacteria  normal  0.195928  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  35.82 
 
 
337 aa  115  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0746  LytR family transcription antiterminator  30.63 
 
 
398 aa  114  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  30.12 
 
 
303 aa  115  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0694  LytR family transcriptional regulator  30.63 
 
 
398 aa  114  2.0000000000000002e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0354301  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  35.82 
 
 
337 aa  115  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  36.32 
 
 
304 aa  115  2.0000000000000002e-24  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  35.82 
 
 
333 aa  115  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0783  LytR family transcription antiterminator  30.63 
 
 
398 aa  114  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  30.12 
 
 
303 aa  115  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  31.72 
 
 
414 aa  115  2.0000000000000002e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_1057  cell envelope-related transcriptional attenuator  35.35 
 
 
333 aa  115  2.0000000000000002e-24  Lactobacillus reuteri DSM 20016  Bacteria  normal  0.0371332  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  35.82 
 
 
338 aa  115  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  29.02 
 
 
338 aa  115  2.0000000000000002e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1157  transcriptional regulator  31 
 
 
334 aa  115  2.0000000000000002e-24  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.000000000000266671  hitchhiker  6.72858e-19 
 
 
-
 
NC_011773  BCAH820_0878  transcription antiterminator, LytR family  30.63 
 
 
398 aa  114  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.78734e-21 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  31.64 
 
 
480 aa  114  2.0000000000000002e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  38.1 
 
 
304 aa  114  3e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  30.12 
 
 
303 aa  114  3e-24  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3273  cell envelope-related transcriptional attenuator  31.58 
 
 
345 aa  114  3e-24  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00000492202  n/a   
 
 
-
 
NC_009674  Bcer98_0648  cell envelope-related transcriptional attenuator  29.89 
 
 
388 aa  114  3e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.500203  n/a   
 
 
-
 
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